prot_H-elongata_contig178178.4695.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig178178.4695.1
Unique Nameprot_H-elongata_contig178178.4695.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 6.910e-29
Identity = 69/161 (42.86%), Postives = 99/161 (61.49%), Query Frame = 0
Query:   11 RARGREITVATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRSEYSAFNQAGYSVYCSGE--CGQGGVGLAIRTSITRAAR-SPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            R +G+ + VAT NVRT+AV G +G G A  +L+   R    V+G+QETRR+  + F  AG+ V+C G    G  GVG+A++ S+ + +  + EFI +RL+ + L   G   A+ F  A APTE   AS+K  FW +LD  V  +P  E ++VL+DANARTG
Sbjct:   52 RQQGQLLRVATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTETGGVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTG 212          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: UPI00073FE2D8 (craniofacial development protein 2-like n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI00073FE2D8)

HSP 1 Score: 70.1 bits (170), Expect = 5.580e-11
Identity = 45/152 (29.61%), Postives = 76/152 (50.00%), Query Frame = 0
Query:   19 VATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRSEYSAFNQAGYSVYCSG--ECGQGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            ++T N+R M+  GK  +     I     RL  D++G+ E  R +   F    +SVY SG  E  + GV L    +I  A  S    SDR++ + +   G+   +T    YAPT          F+T+++ A+E+VP+ + ++++ D NA+ G
Sbjct:   66 ISTWNIRGMS-QGKLDI-----IKREMIRLNIDLLGISELHRKDNGHFQLDDFSVYYSGHQELRRNGVALIAHKNIAHAVESYTIFSDRIVAICI--CGKPLNVTVLQVYAPTTDAPEDESERFYTKIEEALEQVPKKDIIYIMGDFNAKVG 209          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: W5MYU0_LEPOC (Reverse transcriptase domain-containing protein n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MYU0_LEPOC)

HSP 1 Score: 70.1 bits (170), Expect = 6.350e-11
Identity = 45/152 (29.61%), Postives = 76/152 (50.00%), Query Frame = 0
Query:   19 VATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRSEYSAFNQAGYSVYCSG--ECGQGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            ++T N+R M+  GK  +     I     RL  D++G+ E  R +   F    +SVY SG  E  + GV L    +I  A  S    SDR++ + +   G+   +T    YAPT          F+T+++ A+E+VP+ + ++++ D NA+ G
Sbjct:   21 ISTWNIRGMS-QGKLDI-----IKREMIRLNIDLLGISELHRKDNGHFQLDDFSVYYSGHQELRRNGVALIAHKNIAHAVESYTIFSDRIVAICI--CGKPLNVTVLQVYAPTTDAPEDESERFYTKIEEALEQVPKKDIIYIMGDFNAKVG 164          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: UPI000C7832C2 (craniofacial development protein 2-like n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000C7832C2)

HSP 1 Score: 65.9 bits (159), Expect = 9.160e-10
Identity = 46/154 (29.87%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   16 EITVATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRSEYSAFNQAGYSVYCSGECGQG-GVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            EI + T NVR     G + VG    +++   +  ++++ LQET++ E        Y+   SG   +  G G  +   I       + +SDRL    L  RG+ + I+    +APTE  +  +K AF+ +L +  +E+PR++   VL DANA+ G
Sbjct:   25 EIKIGTWNVR-----GLNQVGAMKQLISEIRKQKFEIVALQETKQKESVMMEIEKYAFLNSGGDNRVLGTGFLVSPEIKSLIMKFKPVSDRLC--YLRIRGKFQNISLINIHAPTEEADLESKEAFYEKLQKEYDEIPRYDLKIVLGDANAKIG 171          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: W2T9B2_NECAM (Uncharacterized protein (Fragment) n=1 Tax=Necator americanus TaxID=51031 RepID=W2T9B2_NECAM)

HSP 1 Score: 59.7 bits (143), Expect = 5.470e-8
Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 0
Query:   47 RLGYDVIGLQETRRSE-YSAFNQAGYSVYCSGEC---GQGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            ++ YDVIGL ETRR    +A  + G  ++  G C   G GGVG+ I+TS+T+   S E ++ R+ ++ +   G   A+T FVAYAPT +       AF+  ++    E     ++ V  D NA+ G
Sbjct:   29 KIKYDVIGLTETRRRHPLNAVYETGEELFL-GTCDSRGVGGVGVLIKTSMTKNIDSFEQLTTRIGRLRMRRCGSTPALTIFVAYAPTSSYE-EEVDAFYMNMEEFYREGHAFYKVIVC-DFNAKVG 151          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: A0A0C2FEX7_9BILA (Uncharacterized protein (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2FEX7_9BILA)

HSP 1 Score: 58.9 bits (141), Expect = 1.300e-7
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   47 RLGYDVIGLQETRRSE-YSAFNQAGYSVYCSGEC---GQGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEE 150
            ++GYDVIGL ETRR +  +A    G  ++  G C   G GGVG+ + T++     S E ++ R+ ++ L   G   A+T FVAYAPT + +     AF+  L+    E
Sbjct:    5 KIGYDVIGLTETRRHQPLNATFDTGEELFL-GTCDSRGVGGVGVLVNTNLAINIDSFEQLTTRIGRLRLRRCGSMPAVTIFVAYAPTSSYDEEEIEAFYMDLENFYRE 111          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: A0A0K0DIY0_ANGCA (Uncharacterized protein n=1 Tax=Angiostrongylus cantonensis TaxID=6313 RepID=A0A0K0DIY0_ANGCA)

HSP 1 Score: 55.1 bits (131), Expect = 1.470e-6
Identity = 40/134 (29.85%), Postives = 65/134 (48.51%), Query Frame = 0
Query:   17 ITVATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRSE-YSAFNQAGYSVYCSGEC---GQGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDR 146
            +T+ T + RT+A +         D+L     +GYDV+GL ETRR     A    G  ++  G C   G GGVG+ + T+++    S E ++  + ++ L+  G   A+T FV YA T          F+  L++
Sbjct:    1 MTICTYSARTLASESS-----IEDLLMQTRMIGYDVMGLAETRRRHPLDAVYDTGEELFL-GTCDDRGVGGVGILVNTTLSMNIDSFEQLTTPIGRLRLKRCGSIPALTIFVVYAATSNYEEEEVEVFYMDLEK 128          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: A0A016SAW8_9BILA (Uncharacterized protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016SAW8_9BILA)

HSP 1 Score: 55.5 bits (132), Expect = 3.230e-6
Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 0
Query:   17 ITVATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRS-EYSAFNQAGYSVYCSGEC---GQGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEE 150
            +T+ T N R +A +         D++    ++ YDVIGL ETRR    +A    G  ++  G C   G GGVG+ + T++     S + ++ R+ ++ L   G  +A+T FVAYAPT + +      F+  L++  +E
Sbjct:    2 MTICTFNARKLASEAS-----IEDLMVQARKIRYDVIGLNETRRHWPLNATFDTGEELFL-GTCDSRGVGGVGVLVNTNLAMNIDSFKQLTTRIGRLRLRRCGSMRALTVFVAYAPTCSNSEDVIEDFYVDLEKFYKE 133          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: A0A6G0VWE7_APHCR (Reverse transcriptase domain-containing protein n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VWE7_APHCR)

HSP 1 Score: 54.7 bits (130), Expect = 1.320e-5
Identity = 39/158 (24.68%), Postives = 74/158 (46.84%), Query Frame = 0
Query:   15 REITVATQNVRTMAVDGKHGVGWAVDILNVYDRLGYDVIGLQETRRSEYSAFNQAGYSVYCSGECG----QGGVGLAIRTSITRAARSPEFISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            R + + T N+RT+   G   +     I++   +    ++ LQE R  +  +      +++ SG CG    + GVG  I   +       E I+ R+  + L+  G+   I     ++PTE ++A  K AF+ +++R  + +PR     ++ D NA+ G
Sbjct:   38 RILRIGTWNIRTLFKPGALKI-----IIDEITKYNLQIVALQEIRWPDKGSIKHKETTIFYSG-CGDERHEFGVGFVINDRLLHNVNKFEAINKRICFIRLKISGQN--IIIINCHSPTEDKDAETKDAFYEKMERTYDSLPRRAIKIIIGDMNAKIG 187          
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Match: A0A8J9W137_BRALA (Hypp565 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9W137_BRALA)

HSP 1 Score: 52.4 bits (124), Expect = 8.540e-5
Identity = 44/130 (33.85%), Postives = 64/130 (49.23%), Query Frame = 0
Query:   43 NVYDRLGYDVIGLQETRRSEYSAFNQAGYSVYCSG-ECGQG--GVGLAIRTSITRAARSPEFISDRLLKVILE-PRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEEVPRHEQLFVLMDANARTG 168
            N  DRL   V GL E R     +     ++   SG + GQ   GV LA+  S +RA    + +++RLL   L    GR   I   VAYAPT       K  F+ ++   ++++ RH+ ++VL D NA TG
Sbjct:    8 NELDRLSVAVAGLTEVRWPGSGSHVANDFNFLWSGRDDGQHRQGVALALAPSASRALVHWKPVNNRLLLARLRHTHGRVSVI---VAYAPTNMAPDEEKDEFYIQMSALMDDISRHDIIWVLGDFNATTG 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178178.4695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JBD7_9PHAE6.910e-2942.86Reverse transcriptase domain-containing protein n=... [more]
UPI00073FE2D85.580e-1129.61craniofacial development protein 2-like n=1 Tax=Le... [more]
W5MYU0_LEPOC6.350e-1129.61Reverse transcriptase domain-containing protein n=... [more]
UPI000C7832C29.160e-1029.87craniofacial development protein 2-like n=1 Tax=An... [more]
W2T9B2_NECAM5.470e-834.92Uncharacterized protein (Fragment) n=1 Tax=Necator... [more]
A0A0C2FEX7_9BILA1.300e-736.11Uncharacterized protein (Fragment) n=1 Tax=Ancylos... [more]
A0A0K0DIY0_ANGCA1.470e-629.85Uncharacterized protein n=1 Tax=Angiostrongylus ca... [more]
A0A016SAW8_9BILA3.230e-630.43Uncharacterized protein n=1 Tax=Ancylostoma ceylan... [more]
A0A6G0VWE7_APHCR1.320e-524.68Reverse transcriptase domain-containing protein n=... [more]
A0A8J9W137_BRALA8.540e-533.85Hypp565 protein n=1 Tax=Branchiostoma lanceolatum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 37..168
e-value: 4.1E-13
score: 51.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 13..166
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 32..159
e-value: 3.2E-7
score: 30.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig178178contigH-elongata_contig178178:310..837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig178178.4695.1mRNA_H-elongata_contig178178.4695.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig178178 310..837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig178178.4695.1 ID=prot_H-elongata_contig178178.4695.1|Name=mRNA_H-elongata_contig178178.4695.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
LRKSKASNRARARGREITVATQNVRTMAVDGKHGVGWAVDILNVYDRLGY
DVIGLQETRRSEYSAFNQAGYSVYCSGECGQGGVGLAIRTSITRAARSPE
FISDRLLKVILEPRGRAKAITFFVAYAPTETQNASNKHAFWTRLDRAVEE
VPRHEQLFVLMDANARTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase