prot_H-elongata_contig178100.4694.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig178100.4694.1
Unique Nameprot_H-elongata_contig178100.4694.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 5.050e-7
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 PWECPPAPVVEKGLDAMENYYNELRNTKPV-----LIDLRKIVFIGESGAGKTSLIKSIKAGKG 59
            PW  PP  VVEKGL A+E+Y  ++R  +        + L K+V +G S AGKTSL+ SI  G+G
Sbjct:  185 PWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRG 248          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A6P4XTM6_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XTM6_BRABE)

HSP 1 Score: 53.9 bits (128), Expect = 6.910e-7
Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    3 ECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSIKAGK 58
            + PP  V + G++++  Y  E+R T+PV ++ RKI+  GESGAGKTS+I ++  G+
Sbjct:  208 QMPPRHVCDSGVESVFQYLREIRRTRPVEVNRRKILVFGESGAGKTSMIHAMLNGR 263          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A7D9EZW1_PARCT (Malignant fibrous histiocytoma-amplified sequence 1 homolog (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EZW1_PARCT)

HSP 1 Score: 52.0 bits (123), Expect = 3.270e-6
Identity = 22/58 (37.93%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 PWECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSIKAGK 58
            P + PP  V  +G++++ NY+  ++NTK +     K+V +GES AGKTSL+ ++  G+
Sbjct:  298 PLQVPPVHVCNQGIESVRNYFKAMKNTKNIHAKRLKVVVLGESMAGKTSLVNALMTGE 355          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A7D9HH86_PARCT (Malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HH86_PARCT)

HSP 1 Score: 52.0 bits (123), Expect = 3.310e-6
Identity = 22/58 (37.93%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 PWECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSIKAGK 58
            P + PP  V  +G+ ++ NY+  ++NTK +     K++ +GES AGKTSL+K++  G+
Sbjct:  298 PLQVPPVHVCNQGIQSVRNYFEAMKNTKNIHAKRLKVLVLGESMAGKTSLVKALMTGE 355          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A1G3LK97_9SPIR (COR domain-containing protein n=1 Tax=Spirochaetes bacterium GWB1_27_13 TaxID=1802173 RepID=A0A1G3LK97_9SPIR)

HSP 1 Score: 50.4 bits (119), Expect = 1.160e-5
Identity = 20/54 (37.04%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 PWECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSI 54
            P E PP  ++E+G +A+ NY+++++    + I   K++F+GE G+GKTSL++ +
Sbjct:  355 PIESPPIEIIEQGKEAIRNYFSQIKKHGTIPIYEAKLMFVGEPGSGKTSLMEKL 408          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A6P4Y5Y3_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y5Y3_BRABE)

HSP 1 Score: 50.4 bits (119), Expect = 1.170e-5
Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    5 PPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSIKAGK 58
            PPA V  +G+DA+  Y++EL  ++  +    K+V +GE+ AGKTSL++++ +GK
Sbjct:  423 PPAEVCRQGIDAIRQYFDELERSEEAVSAHLKVVVLGETMAGKTSLVQTLNSGK 476          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A1D8TVJ7_9CYAN (GTPase n=2 Tax=Moorena TaxID=1155738 RepID=A0A1D8TVJ7_9CYAN)

HSP 1 Score: 50.1 bits (118), Expect = 1.590e-5
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    5 PPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSI 54
            PP  VV KG+DA++ Y+ +LR      I   K++ +GE+GAGKTSL K I
Sbjct:  260 PPPEVVSKGVDAIKQYFRQLRKEGKDYIYEAKLLIVGEAGAGKTSLAKKI 309          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A6M0BEZ1_9CYAN (GTPase n=1 Tax=Moorena sp. SIO3I6 TaxID=2607831 RepID=A0A6M0BEZ1_9CYAN)

HSP 1 Score: 49.7 bits (117), Expect = 2.170e-5
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    1 PWECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSI 54
            P   PP  VV KG+DA++ Y+ +LR      I   K++ +GE GAGKTSL + I
Sbjct:  219 PLVVPPPEVVSKGVDAVKQYFRQLREEGEAYIYEAKLLIVGEPGAGKTSLAQKI 272          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A6P0ZUE8_9CYAN (GTPase n=1 Tax=Moorena sp. SIO1F2 TaxID=2607819 RepID=A0A6P0ZUE8_9CYAN)

HSP 1 Score: 49.7 bits (117), Expect = 2.170e-5
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    1 PWECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSI 54
            P   PP  VV KG+DA++ Y+ +LR      I   K++ +GE GAGKTSL + I
Sbjct:  256 PLVVPPPEVVSKGVDAVKQYFRQLREEGEAYIYEAKLLIVGEPGAGKTSLAQKI 309          
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Match: A0A6P4XPW3_BRABE (uncharacterized protein LOC109462063 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XPW3_BRABE)

HSP 1 Score: 49.3 bits (116), Expect = 3.000e-5
Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    5 PPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSLIKSIKAGK 58
            PPA V ++G+ A+  Y+ EL  +K  +    K+V +GE+ AGKTSLI+++++G+
Sbjct:  625 PPAEVCDQGIAAIRQYFEELERSKETISAHLKVVILGETMAGKTSLIQTLESGE 678          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178100.4694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JW02_9PHAE5.050e-745.31Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6P4XTM6_BRABE6.910e-742.86malignant fibrous histiocytoma-amplified sequence ... [more]
A0A7D9EZW1_PARCT3.270e-637.93Malignant fibrous histiocytoma-amplified sequence ... [more]
A0A7D9HH86_PARCT3.310e-637.93Malignant fibrous histiocytoma-amplified sequence ... [more]
A0A1G3LK97_9SPIR1.160e-537.04COR domain-containing protein n=1 Tax=Spirochaetes... [more]
A0A6P4Y5Y3_BRABE1.170e-540.74malignant fibrous histiocytoma-amplified sequence ... [more]
A0A1D8TVJ7_9CYAN1.590e-548.00GTPase n=2 Tax=Moorena TaxID=1155738 RepID=A0A1D8T... [more]
A0A6M0BEZ1_9CYAN2.170e-544.44GTPase n=1 Tax=Moorena sp. SIO3I6 TaxID=2607831 Re... [more]
A0A6P0ZUE8_9CYAN2.170e-544.44GTPase n=1 Tax=Moorena sp. SIO1F2 TaxID=2607819 Re... [more]
A0A6P4XPW3_BRABE3.000e-540.74uncharacterized protein LOC109462063 n=1 Tax=Branc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 38..56
e-value: 5.2E-7
score: 31.7
NoneNo IPR availableGENE3D1.10.10.2190coord: 9..37
e-value: 5.2E-7
score: 31.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig178100contigH-elongata_contig178100:181..1290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig178100.4694.1mRNA_H-elongata_contig178100.4694.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig178100 181..1292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig178100.4694.1 ID=prot_H-elongata_contig178100.4694.1|Name=mRNA_H-elongata_contig178100.4694.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
PWECPPAPVVEKGLDAMENYYNELRNTKPVLIDLRKIVFIGESGAGKTSL
IKSIKAGKGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase