prot_H-elongata_contig178090.4693.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: D7FVJ5_ECTSI (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ5_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 1.210e-12 Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0
Query: 1 GHADRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
G + RARIDIRDLNM GLPSL +DR VV VAKHLCG ATDLALR
Sbjct: 260 GVSTRARIDIRDLNMGGLPSLTAEGDDRPVVAVAKHLCGVATDLALR 306
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A6H5KUX2_9PHAE (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX2_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 2.250e-12 Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0
Query: 1 GHADRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALRQ 48
G + RARIDIRDL+M GLPSL +DR VV VAKHLCG ATDLALR+
Sbjct: 283 GVSTRARIDIRDLDMGGLPSLTAAGDDRPVVAVAKHLCGVATDLALRR 330
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A821F753_9BILA (tRNA:m(4)X modification enzyme TRM13 n=8 Tax=Rotaria TaxID=231623 RepID=A0A821F753_9BILA) HSP 1 Score: 56.2 bits (134), Expect = 6.780e-8 Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 4 DRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
+R R+DIRDL +A LPS++ ++ V+++KHLCG ATDLALR
Sbjct: 234 ERYRLDIRDLYLAELPSIKNSQSEKHTVIISKHLCGGATDLALR 277
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A817CAC3_9BILA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817CAC3_9BILA) HSP 1 Score: 55.1 bits (131), Expect = 1.670e-7 Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 4 DRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
+R R+DIRDL ++ LPS++ + VV+++KHLCG ATDLALR
Sbjct: 209 ERYRLDIRDLYLSELPSIKNNQFQKQVVIISKHLCGGATDLALR 252
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A817KPL2_9BILA (tRNA:m(4)X modification enzyme TRM13 n=12 Tax=Rotaria TaxID=231623 RepID=A0A817KPL2_9BILA) HSP 1 Score: 55.1 bits (131), Expect = 1.730e-7 Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 4 DRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
+R R+DIRDL ++ LPS++ + VV+++KHLCG ATDLALR
Sbjct: 234 ERYRLDIRDLYLSELPSIKNNQFQKQVVIISKHLCGGATDLALR 277
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A819LP60_9BILA (tRNA:m(4)X modification enzyme TRM13 n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819LP60_9BILA) HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7 Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 4 DRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
+R R+DIRDL ++ LPS++ + VV+++KHLCG ATDLALR
Sbjct: 234 ERYRLDIRDLYLSELPSIKNNQFQKQVVIISKHLCGGATDLALR 277
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A7S2RS80_9STRA (tRNA:m(4)X modification enzyme TRM13 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS80_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 2.910e-6 Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0
Query: 5 RARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
RAR+DIR LN+AGL + + + +V VAKHLCG ATDLALR
Sbjct: 214 RARVDIRHLNLAGLDT-----QGKPMVAVAKHLCGVATDLALR 251
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: A0A5J4NS90_9TREM (tRNA:m(4)X modification enzyme TRM13 (Fragment) n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NS90_9TREM) HSP 1 Score: 50.4 bits (119), Expect = 3.400e-6 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query: 1 GHADRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
G+ R R+DI L++ LPS + C + +V +AKHLCG ATDLALR
Sbjct: 15 GNFTRVRMDIAQLDLKSLPSFQNRC--KPIVAIAKHLCGDATDLALR 59
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: B6S350_PHIRO (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Philodina roseola TaxID=96448 RepID=B6S350_PHIRO) HSP 1 Score: 51.2 bits (121), Expect = 3.990e-6 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0
Query: 4 DRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
+R R+DIRDL +A LP L VVV++KHLCG ATDLALR
Sbjct: 232 ERFRLDIRDLFLANLPCLTEIQPALDVVVISKHLCGGATDLALR 275
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Match: UPI001402B1B5 (tRNA:m(4)X modification enzyme TRM13 homolog n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402B1B5) HSP 1 Score: 50.8 bits (120), Expect = 5.450e-6 Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 4 DRARIDIRDLNMAGLPSLRRGCEDRAVVVVAKHLCGAATDLALR 47
+R +IDI DLN++ +P L R E VV + KHLCGAATDLALR
Sbjct: 238 ERLQIDIEDLNLSNVPLLAR--EKLPVVGIGKHLCGAATDLALR 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178090.4693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig178090.4693.1 ID=prot_H-elongata_contig178090.4693.1|Name=mRNA_H-elongata_contig178090.4693.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bpback to top |