prot_H-elongata_contig177224.4652.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig177224.4652.1
Unique Nameprot_H-elongata_contig177224.4652.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 9.680e-16
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0
Query:   15 WIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKVQQ 96
            WIGDS ++ H T++ + VYN R P   +  +   DG +L+ EC G++DVVFH R D  +T+ D++ VPDL F++ S N +Q+
Sbjct:   16 WIGDSASTVHATSDGTHVYNTRPPLAEETFLFIGDGRKLKAECFGSLDVVFHCREDVLVTMKDIAVVPDLAFDLVSLNVIQE 97          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A6H5K3I1_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.450e-10
Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = 0
Query:   11 RNDFWIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFH-----GRSDEPITLCDVSHVPDLKFNIFSFNKVQQ 96
            R  FW  DSGA+    +++ +++++R  P GK  +   +GT LRV+CVG +++ FH     G  D  + + DV  VP + FN+FS +  Q+
Sbjct:  637 REKFWA-DSGATNTFVSSSHQMFDLRPVPTGKEYIQVGNGTYLRVQCVGKVNMAFHMQDQGGERDFRVQMSDVYVVPGITFNLFSLHHTQR 726          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A834U2Q9_9FABA (F-box protein interaction domain protein n=1 Tax=Senna tora TaxID=362788 RepID=A0A834U2Q9_9FABA)

HSP 1 Score: 57.4 bits (137), Expect = 1.760e-7
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   12 NDFWIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKVQQ 96
            ND WI DSGAS HMT NAS +++   P     +V   DGT  +V  +G++ +       + ITL +V HVP L  N+ S +K+ Q
Sbjct:   92 NDSWIVDSGASDHMTGNAS-LFSTLGPCKTSLQVKIADGTMAKVLGIGSVKI------SDTITLLNVLHVPTLACNLLSISKLTQ 169          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: UPI00053F6F2D (myosin-G heavy chain-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F6F2D)

HSP 1 Score: 56.2 bits (134), Expect = 4.030e-7
Identity = 30/88 (34.09%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    9 DARNDFWIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKVQQ 96
            +A +  W  DSG++ HMT    K+ ++  P  G   ++  +GT L ++ VG + +    R   P+ L  V HVP LK N+ S NK+ Q
Sbjct:  193 EANDSVWYPDSGSATHMTPQDGKLSSI-LPYTGSSSIIVGNGTSLPIKSVGTLTLKTSSR---PLILSSVCHVPSLKHNLLSVNKLCQ 276          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A7M7R4X9_NASVI (Uncharacterized protein n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7R4X9_NASVI)

HSP 1 Score: 53.1 bits (126), Expect = 2.670e-6
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    2 AFAA-QLQDARNDFWIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVEC-VGNIDVV-FHGRSDEPITLCDVSHVPDLKFNIFSFN 92
            AFA+ Q  ++  + W  DSGAS HMT++     N    PF +   +      L   C +G I+V+ F+G+S     L +V +VPDLK+N+FSFN
Sbjct:   83 AFASIQNSNSHTNLWYKDSGASSHMTHHKDWFLNYE--PFKRLTWVHIGDVSLLEACGLGEINVLSFNGKSWNLSHLSNVVYVPDLKYNLFSFN 174          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A834T3C8_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834T3C8_9FABA)

HSP 1 Score: 53.5 bits (127), Expect = 3.600e-6
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0
Query:   15 WIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKVQQ 96
            WI DSGAS HMT NAS +++   P     +V   DGT  +V  +G+I +         +TL +V +VP L  N+ S +K+ Q
Sbjct:   74 WIVDSGASDHMTGNAS-LFSTLAPCASSLQVKIADGTMAKVSAIGSIKI------STTLTLMNVLYVPALACNLLSISKLTQ 148          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A834SY91_9FABA (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SY91_9FABA)

HSP 1 Score: 53.1 bits (126), Expect = 5.270e-6
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   12 NDFWIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKV 94
            ND WI DSGAS HMT NAS +++   P      V   +GT ++V  +G++ +  +      +TL +V HVP L  N+ S +K+
Sbjct:  358 NDSWIIDSGASDHMTGNAS-LFSDLAPCTTSLLVKIANGTMVKVSSIGSVKITNN------LTLLNVLHVPTLTCNLLSVSKL 433          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A8J2WLN9_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WLN9_9CRUS)

HSP 1 Score: 52.8 bits (125), Expect = 7.020e-6
Identity = 27/76 (35.53%), Postives = 37/76 (48.68%), Query Frame = 0
Query:   15 WIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFS 90
            W  DSGA+ HMT+  S ++N +    G   V    G  L V   G + V+  G  +    +  V HVPDL  N+FS
Sbjct:  345 WFADSGATSHMTDQRSLIFNYKPVTPGSWMVTGIGGATLPVHGQGQVSVLTEGEVESERIISPVLHVPDLGTNLFS 420          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A834WYN7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WYN7_9FABA)

HSP 1 Score: 51.6 bits (122), Expect = 1.820e-5
Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   15 WIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKVQQ 96
            W  DSGAS H+TN+AS +++   P  G  +V   +GT L +  VG  ++  H  S + ++L ++ HVP +  N+ S +K  Q
Sbjct:  322 WYPDSGASHHITNDASNLHS-HQPYTGSEQVHAANGTGLVIHNVGQSEI--HTNSSKILSLKNLFHVPSVTKNLLSVSKCAQ 400          
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Match: A0A835CFI5_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A835CFI5_9FABA)

HSP 1 Score: 51.2 bits (121), Expect = 2.530e-5
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0
Query:   15 WIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDGTRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNK 93
            W  DSGAS H+TN+AS +  VR P  G+  V T +GT L ++ VG  ++     + + + L  + HVP +  N+ S +K
Sbjct:  310 WYPDSGASSHLTNDASNL-QVRQPYNGQELVHTANGTGLPIQSVGYSNI--SSSNSQILHLSQLYHVPSVSKNLISVSK 385          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig177224.4652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JCD8_9PHAE9.680e-1642.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3I1_9PHAE3.450e-1035.16Integrase catalytic domain-containing protein n=5 ... [more]
A0A834U2Q9_9FABA1.760e-740.00F-box protein interaction domain protein n=1 Tax=S... [more]
UPI00053F6F2D4.030e-734.09myosin-G heavy chain-like n=1 Tax=Beta vulgaris su... [more]
A0A7M7R4X9_NASVI2.670e-638.30Uncharacterized protein n=1 Tax=Nasonia vitripenni... [more]
A0A834T3C8_9FABA3.600e-637.80Retrovirus-related Pol polyprotein from transposon... [more]
A0A834SY91_9FABA5.270e-637.35Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J2WLN9_9CRUS7.020e-635.53Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A834WYN7_9FABA1.820e-535.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A835CFI5_9FABA2.530e-536.71Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig177224contigH-elongata_contig177224:780..1067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig177224.4652.1mRNA_H-elongata_contig177224.4652.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig177224 780..1088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig177224.4652.1 ID=prot_H-elongata_contig177224.4652.1|Name=mRNA_H-elongata_contig177224.4652.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
MAFAAQLQDARNDFWIGDSGASCHMTNNASKVYNVRTPPFGKHKVMTRDG
TRLRVECVGNIDVVFHGRSDEPITLCDVSHVPDLKFNIFSFNKVQQ
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