prot_H-elongata_contig176845.4637.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig176845.4637.1
Unique Name	prot_H-elongata_contig176845.4637.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	142

Homology

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: D8LQD8_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQD8_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 5.210e-39
Identity = 78/120 (65.00%), Postives = 91/120 (75.83%), Query Frame = 0

Query:    3 LRVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRG-----RFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFEREVTGSDRGESSAGEV 117
            L+  S PQVQRVCYSTCSV+  ENEDVVAKAL+QQP P+PL   +TA         RF LSRCL RWPRRGLAV+GL +AQAACL R +P EDETNGFFVA FER V+ S+ G +S+GE+
Sbjct:  411 LKAMSFPQVQRVCYSTCSVHAVENEDVVAKALDQQPTPSPLTTASTAXXXXAASSERFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFERGVS-SNGGVTSSGEL 529

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A024URM4_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URM4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.130e-22
Identity = 55/110 (50.00%), Postives = 62/110 (56.36%), Query Frame = 0

Query:    1 ASLRVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFEREVTGSDRG 110
            A ++ FS PQV RV YSTCS++  ENE VV  AL+  P                F L +CLP WPRRG+ V GL   QA CLVR N  ED TNGFFVA FER     D G
Sbjct:  384 ALVKAFSFPQVNRVSYSTCSIFETENEHVVVAALKANPA---------------FQLVKCLPSWPRRGIVVPGLTPTQADCLVRANGLEDGTNGFFVAYFERIAAADDAG 478

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: T0R3E2_SAPDV (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R3E2_SAPDV)

HSP 1 Score: 99.4 bits (246), Expect = 1.380e-21
Identity = 53/100 (53.00%), Postives = 62/100 (62.00%), Query Frame = 0

Query:    4 RVFSAPQVQRVCYSTCSVYVRENEDVVAKALE-QQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFER 102
            + FS P VQR+ YSTCS++ +ENEDVV  AL+  Q   TP            F L + LP WPRRG+ V GL + QA CLVR N  ED TNGFFVA FER
Sbjct:  385 KAFSFPSVQRIAYSTCSIFEKENEDVVVAALQASQAAGTP------------FHLVKALPTWPRRGVVVDGLSDDQADCLVRANGLEDGTNGFFVAYFER 472

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A485KQA6_9STRA (Aste57867_10120 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQA6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.430e-21
Identity = 51/99 (51.52%), Postives = 60/99 (60.61%), Query Frame = 0

Query:    4 RVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFER 102
            + FS PQV+RV YSTCS++ +ENE+VV  AL   PE               F L + LP WPRRG+ + GL   QA CLVR N  ED TNGFFVA FER
Sbjct:  392 KAFSFPQVRRVAYSTCSIFEKENEEVVVAALTSNPE---------------FHLVKALPTWPRRGVVIPGLSPDQADCLVRANGLEDGTNGFFVAYFER 475

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A2D4CCB2_PYTIN (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCB2_PYTIN)

HSP 1 Score: 99.0 bits (245), Expect = 1.570e-21
Identity = 56/106 (52.83%), Postives = 65/106 (61.32%), Query Frame = 0

Query:    1 ASLRVFSAPQVQRVCYSTCSVYVRENEDVVAKAL---EQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFERE 103
            A L+ FS PQV+RV YSTCS++ +ENE+VVA AL   + Q    P            FAL  CL  WPRRGL VAGL   QA  LVR +  ED TNGFFVA FER+
Sbjct:  369 ALLKAFSFPQVERVVYSTCSIFSKENEEVVAAALSSAQNQAAERP------------FALRPCLETWPRRGLEVAGLSAEQAKALVRADGHEDATNGFFVAYFERQ 462

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A8K1FE13_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE13_PYTOL)

HSP 1 Score: 99.0 bits (245), Expect = 1.860e-21
Identity = 52/102 (50.98%), Postives = 67/102 (65.69%), Query Frame = 0

Query:    1 ASLRVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFER 102
            A L+ FS PQV+RV YSTCS++ +ENE+VV  AL+ +       NR+    +  F L +CLP W RRG+ + GL+E QA  LVR +  ED TNGFFVA FER
Sbjct:  351 ALLKAFSFPQVERVAYSTCSIFQKENEEVVVNALQSKQ------NRSA---KRPFVLLKCLPTWHRRGMVIPGLNEEQAQSLVRADGHEDSTNGFFVAYFER 443

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A662XRE0_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRE0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.410e-21
Identity = 54/99 (54.55%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    4 RVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFER 102
            + FS PQV+RV YSTCS++ +E+EDVVA AL+ +        RA       F L  CL  WPRRGL VAGL   QA  LVR N  ED TNGFFVA FER
Sbjct:  385 KAFSFPQVERVVYSTCSIFQKEDEDVVAAALKSEENV-----RAARP----FVLKPCLRSWPRRGLEVAGLSAEQAKALVRANGLEDSTNGFFVAYFER 474

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A1V9ZRI8_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRI8_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.370e-21
Identity = 51/99 (51.52%), Postives = 61/99 (61.62%), Query Frame = 0

Query:    4 RVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFER 102
            + FS P VQRV YSTCS++ +ENE+VV  AL           RA+   +  F L + LP WPRRG+ + GL   QA CLVR N  ED TNGFFVA FER
Sbjct:  378 KAFSFPHVQRVAYSTCSIFEKENEEVVVAAL-----------RASEAAQTPFHLVKALPTWPRRGVVIPGLSHDQADCLVRANGLEDGTNGFFVAYFER 465

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: K3WX53_GLOUD (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX53_GLOUD)

HSP 1 Score: 97.4 bits (241), Expect = 7.000e-21
Identity = 56/124 (45.16%), Postives = 70/124 (56.45%), Query Frame = 0

Query:    1 ASLRVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQP---EPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFEREVTGSDRGESSAGEVTKKR 121
            A L+ FS PQVQR+ YSTCS++ +ENE+VV  AL  +    +P P            F L  CL  WPRRG+ + GL   QA  LVR N  ED TNGFFVA FER     +  +S++    KKR
Sbjct:  352 ALLKAFSFPQVQRITYSTCSIFQKENEEVVIAALNSEANKNDPRP------------FVLRPCLQTWPRRGMEIDGLSADQAKALVRANGLEDSTNGFFVAYFERASEPQNATKSASKSNKKKR 463

[Close]

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Match: A0A6G0XQE7_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQE7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.850e-21
Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 0

Query:    1 ASLRVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATATLRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATFER 102
            A L+ FS P V+RV YSTCS++ +ENE+VV  AL++                  F L + LP WPRRG+A+ GL   QA CLVR N  ED TNGFFVA FER
Sbjct:  367 ALLKAFSFPNVRRVSYSTCSIFEKENEEVVVAALQKNSS---------------FQLVKVLPTWPRRGVAIPGLTPDQADCLVRANGLEDGTNGFFVAYFER 453

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot

BLAST of mRNA_H-elongata_contig176845.4637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQD8_ECTSI	5.210e-39	65.00	SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=...	[more]
A0A024URM4_9STRA	1.130e-22	50.00	SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=...	[more]
T0R3E2_SAPDV	1.380e-21	53.00	SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=...	[more]
A0A485KQA6_9STRA	1.430e-21	51.52	Aste57867_10120 protein n=1 Tax=Aphanomyces stella...	[more]
A0A2D4CCB2_PYTIN	1.570e-21	52.83	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A8K1FE13_PYTOL	1.860e-21	50.98	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A662XRE0_9STRA	5.410e-21	54.55	SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=...	[more]
A0A1V9ZRI8_9STRA	6.370e-21	51.52	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
K3WX53_GLOUD	7.000e-21	45.16	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A6G0XQE7_9STRA	8.850e-21	50.00	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..137
None	No IPR available	GENE3D	3.40.50.150		coord: 2..109 e-value: 6.8E-20 score: 73.2
None	No IPR available	PANTHER	PTHR22807:SF4	28S RRNA (CYTOSINE-C(5))-METHYLTRANSFERASE-RELATED	coord: 6..113
None	No IPR available	PANTHER	PTHR22807	NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING	coord: 6..113
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PFAM	PF01189	Methyltr_RsmB-F	coord: 14..100 e-value: 1.2E-6 score: 28.3
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PROSITE	PS51686	SAM_MT_RSMB_NOP	coord: 1..103 score: 17.806
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 13..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig176845	contig	H-elongata_contig176845:230..781 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig176845.4637.1	mRNA_H-elongata_contig176845.4637.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig176845 230..781 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig176845.4637.1 ID=prot_H-elongata_contig176845.4637.1|Name=mRNA_H-elongata_contig176845.4637.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
ASLRVFSAPQVQRVCYSTCSVYVRENEDVVAKALEQQPEPTPLVNRATAT
LRGRFALSRCLPRWPRRGLAVAGLDEAQAACLVRVNPAEDETNGFFVATF
EREVTGSDRGESSAGEVTKKRQNRRDKNRKKREARKRKRKRA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001678	MeTrfase_RsmB/NOP2
IPR029063	SAM-dependent_MTases