prot_H-elongata_contig176708.4630.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176708.4630.1
Unique Nameprot_H-elongata_contig176708.4630.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length325
Homology
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.600e-37
Identity = 106/302 (35.10%), Postives = 152/302 (50.33%), Query Frame = 0
Query:   34 TEKALAATQRG-------PRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVA-------LLRGVMEGKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            TE A AA   G       P DI  FH   GH  E + R TA+  G  L G  R C+ CS ++     +P  T  RA ++  ++F+DLSG   V S GG  + ++  DD+TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ERAL L++D  +A       L  G     S  LWAEA+A++C+  N  + +S      PYE+W+G  P     PP  T  +L+    + K  HK  P+      LG   +  RD  R
Sbjct:  489 TEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVR 783          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.620e-37
Identity = 106/302 (35.10%), Postives = 152/302 (50.33%), Query Frame = 0
Query:   34 TEKALAATQRG-------PRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVA-------LLRGVMEGKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            TE A AA   G       P DI  FH   GH  E + R TA+  G  L G  R C+ CS ++     +P  T  RA ++  ++F+DLSG   V S GG  + ++  DD+TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ERAL L++D  +A       L  G     S  LWAEA+A++C+  N  + +S      PYE+W+G  P     PP  T  +L+    + K  HK  P+      LG   +  RD  R
Sbjct:  502 TEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVR 796          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.630e-37
Identity = 106/302 (35.10%), Postives = 152/302 (50.33%), Query Frame = 0
Query:   34 TEKALAATQRG-------PRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVA-------LLRGVMEGKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            TE A AA   G       P DI  FH   GH  E + R TA+  G  L G  R C+ CS ++     +P  T  RA ++  ++F+DLSG   V S GG  + ++  DD+TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ERAL L++D  +A       L  G     S  LWAEA+A++C+  N  + +S      PYE+W+G  P     PP  T  +L+    + K  HK  P+      LG   +  RD  R
Sbjct:  645 TEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVR 939          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.700e-36
Identity = 98/284 (34.51%), Postives = 144/284 (50.70%), Query Frame = 0
Query:   45 PRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVA-------LLRGVMEGKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            P DI  FH   GH  E + R TA+  G  L G  R C+ CS ++     +P  T  RA ++  + F++LSG     S GG  + ++  DD+TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ERAL L++D  +A       L  G    +S  LWAEA+A++C+  N  + +S      PYE+W+G  P     PP  T  +L+    + K  HK  P       LG   +  RD  R
Sbjct:  305 PVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSEPIPNKTSTRAFKKLQRFFVELSGKARAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAIAARIQAPTLYPGAPNYRS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPTAQKCFYLGPGINTNRDCVR 581          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.820e-36
Identity = 105/302 (34.77%), Postives = 151/302 (50.00%), Query Frame = 0
Query:   34 TEKALAATQRG-------PRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVA-------LLRGVMEGKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            TE A AA   G       P DI  FH    H  E + R TA+  G  L G  R C+ CS ++     +P  T  RA ++  ++F+DLSG   V S GG  + ++  DD+TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ERAL L++D  +A       L  G     S  LWAEA+A++C+  N  + +S      PYE+W+G  P     PP  T  +L+    + K  HK  P+      LG   +  RD  R
Sbjct:  654 TEHAYAAIAPGNVKASNAPVDINDFHCAHRHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVR 948          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 3.070e-36
Identity = 96/249 (38.55%), Postives = 131/249 (52.61%), Query Frame = 0
Query:   37 ALAATQRGPRDIIKFHQVLGHPAEKITRNTARMAGVQLSG-IWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPE-SLKIGVIRADGEGEWHGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVALLRGVME-----GKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPF 278
            A AAT   P D+   H   GH  E++ + TA+  GVQL+G     C+ CS S+ +   + KST+ RA  +  +LF++L G     S GGN + ++  DD TR+  V FLKHKS+A  A    + DY A     ++ V R DG GE+ GQF     + GIK++ TPP TP+YNGV ERAL LL D  +A      E       S  LWAEA++ AC   N    +       P EL++G  P   +  PF
Sbjct:  127 AKAAT---PTDLNSDHNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPEELFHGTPPPVGSTHPF 372          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 9.070e-35
Identity = 99/290 (34.14%), Postives = 144/290 (49.66%), Query Frame = 0
Query:   39 AATQRGPRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVA-------LLRGVMEGKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            A     P +I  FH   GH  E + R TA+  G  L G  R C+ CS ++     +P  T  RA +R  ++F+DLSG   V S  G  + ++  D +TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ERAL L++D  +A       L  G     S   WAEA+A+AC+  N  + +S      PYE+W+G  P     PP  T  +L+    + K  HK  P+      LG   +  RD  R
Sbjct:  527 AKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPS--FWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVR 809          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5JM30_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM30_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.580e-33
Identity = 97/282 (34.40%), Postives = 140/282 (49.65%), Query Frame = 0
Query:   40 ATQRGPRDIIKFHQVLGHPAEKITRNTARMAGVQLS-GIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPE-SLKIGVIRADGEGEWHGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVALLRGVMEGKS--------GRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGASYIMLGLAPDFPR 311
            A    P D+ ++H   G   E + R TA   GVQL+ G    C+ CS S  +   V KST  RA ++  ++++DL G     S GGN + ++  DDF+R+  V FLKHKS+A   L   + DY       ++ + R DG GE+ GQF     + GIK++ TPP+TP+YNGV ERAL  L   T A L   ++             LWAEA++ AC   N     S +     YE+++   P   +  PF     L+ S+   K  P+G     +G A + PR
Sbjct:  578 AKAANPTDLNEYHLAHGQARETLLRITAEQQGVQLTDGPLLPCLGCSMSTGQVKPVQKSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGLEKFLADYRTKGVPCEVYIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLNCTATKSNEGDKSAYEMFHDSPPPVGSTYPFLKPAMLK-SRRKAKSQPKGEKGWYVGPAHNHPR 858          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5JAQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ2_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.620e-33
Identity = 98/282 (34.75%), Postives = 139/282 (49.29%), Query Frame = 0
Query:   40 ATQRGPRDIIKFHQVLGHPAEKITRNTARMAGVQLS-GIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPE-SLKIGVIRADGEGEWHGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVALLRGVME-----GKSGRLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPF--GTVGYLRRSKPGHKLAPRGASYIMLGLAPDFPRD 312
            A    P D+ ++H   GH  E + R TA   GVQL+ G    C+ CS S+ +   V K T  RA +   ++++DL G     S GGN + ++  DDF+R+  V FLKHKS+A       + DY       +  + RADG GE+ GQF     + GIK++ TPP+TP+YNGV ERAL L+ D  +A      +          LWAEA++ AC   N     S +     YE+++       +  PF    +  LRR     K  P+G     LG A + PRD
Sbjct:  633 AKAANPTDLNEYHLAHGHAHETLLRITAEQQGVQLTDGPLLPCLGCSMSKAQVKPVQKCTSTRAVQNFFRVYLDLEGTMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTNGVPCEDFIARADGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLNCTATKSNEGDKSAYEMFHNSPSPVGSTYPFLKPAMFKLRRKA---KSQPKGEKGWYLGPAHNHPRD 911          
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Match: A0A6H5K2B9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B9_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.120e-32
Identity = 93/282 (32.98%), Postives = 138/282 (48.94%), Query Frame = 0
Query:   45 PRDIIKFHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTENRADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNATNALRDIINDYFAPESLK-IGVIRADGEGEW-HGQFLSFLSKLGIKRDSTPPYTPQYNGVVERALRLLRDKTVALLRGVMEGKSG-----RLWAEAMAYACDIWNRCTFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLR----RSKPGHKLAPRGASYIMLGLAPDFPRDAFR 315
            P DI  FH   GH  E + R T +  G  L G  R C+  S ++     +P  T  RA ++  ++F+DLSG   V S GG  + ++  D +TR+  V FLKHKS+A  A    + +  A  +   + V+R+D  GE+  G+F     K  IK++ TP ++P+YNGV ER L L++D  +          SG      LWAEA+A++C+  N  + +S      PYE+W+G  P      P  T  +L+    + K  HK  P       LG   +  RD  R
Sbjct:  279 PVDINDFHCTHGHSHEVLLRTTTKQQGTTLVGELRECLGRSTAKGLSKPIPNETSTRAVKKLQRVFVDLSGKAGVQSFGGKWYTLIVKDGYTRWSHVYFLKHKSDAAEAFERYLAENRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERVLGLIKDAELVARIHAPTLYSGPPNYPSLWAEAIAWSCNSLNCTSTTSNPEKKSPYEIWHGHPPL-----PGATYPFLKPAVYKDKGTHKSEPTAQKCFYLGPGTNTNRDFVR 555          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176708.4630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZQ8_9PHAE1.600e-3735.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.620e-3735.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.630e-3735.10Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K1N9_9PHAE1.700e-3634.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JTI6_9PHAE1.820e-3634.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5LL52_9PHAE3.070e-3638.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JXF7_9PHAE9.070e-3534.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JM30_9PHAE3.580e-3334.40Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JAQ2_9PHAE3.620e-3334.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2B9_9PHAE4.120e-3232.98Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 95..280
e-value: 4.8E-24
score: 86.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 106..219
e-value: 2.4E-13
score: 50.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 91..269
score: 17.683
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 37..271
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 37..271
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 109..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176708contigH-elongata_contig176708:156..1130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176708.4630.1mRNA_H-elongata_contig176708.4630.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176708 156..1130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176708.4630.1 ID=prot_H-elongata_contig176708.4630.1|Name=mRNA_H-elongata_contig176708.4630.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=325bp
MPLFSRPIRPQHGLLEIKVCRHVAARSRLPKLPTEKALAATQRGPRDIIK
FHQVLGHPAEKITRNTARMAGVQLSGIWRTCVHCSESRVRRYAVPKSTEN
RADRRAGQLFIDLSGPFHVTSHGGNRFVILCIDDFTRFKIVRFLKHKSNA
TNALRDIINDYFAPESLKIGVIRADGEGEWHGQFLSFLSKLGIKRDSTPP
YTPQYNGVVERALRLLRDKTVALLRGVMEGKSGRLWAEAMAYACDIWNRC
TFSSLDSVTLPYELWYGRRPTFDNIPPFGTVGYLRRSKPGHKLAPRGASY
IMLGLAPDFPRDAFRGRDLTTGQIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf