prot_H-elongata_contig176298.4608.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176298.4608.1
Unique Nameprot_H-elongata_contig176298.4608.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length267
Homology
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BLAST of mRNA_H-elongata_contig176298.4608.1 vs. uniprot
Match: D7FM33_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM33_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.850e-36
Identity = 136/313 (43.45%), Postives = 159/313 (50.80%), Query Frame = 0 
Query:    1 GGKDVGGYTAPSPGERKP-LQLQSRTAPPRLPPISAKEPEKTAPAPAPKP------SGPRSNPFGAAQAVDTTQRDKEIEAKLEAERQSSVRRRDETVRSSGKPDIAAGDSNREETGVGYEGDEAKP------EANSKNAE------------------VEGSERGGEKPAPQRPVGRWAALRREGGGDDRLNHSVGGFSRRDRED-----------DRRGGGFGRD-DRSSFGRRNDGDTGPSGGGFSSSRMEREPVQPP-----APPAGNAFAKRFGSNFDRDLDRTYPRPS-GGMGXXXXXXDRRDDDRR 264
            GG+D G    P+  E +P LQLQSR APP LPP+ +KE +  A             +GPR+NPFGAAQAVDTTQ+DKEIEAK+EA RQ+S RRRDE VRSS   +    D        G  G++A P      +  +K A                     G E G  K  P +PVGRWAALRREG                               D RG    RD +R SFGRRN+GD+  +GGG                   APPAGNAFAKRFGSNFDRD +R YPRP+ GGMG      DRRDDDRR
Sbjct:    8 GGRDGGYDNPPASSEGRPRLQLQSRKAPPPLPPMGSKEDKAAAEXXXXXXXXXXXXAGPRANPFGAAQAVDTTQKDKEIEAKVEAARQTSFRRRDEAVRSSKPAEGGGEDGGATAXXXGAAGEDASPATAAMEDGTTKTAADXXXXXXXXXXXXXXXXXTAGEEDGKPKAEPAKPVGRWAALRREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDGRGXXXXRDGERPSFGRRNEGDS--AGGGXXXXXXXXXXXXXXXXXXXAPPAGNAFAKRFGSNFDRDSER-YPRPNAGGMGGGGGF-DRRDDDRR 316
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176298.4608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM33_ECTSI2.850e-3643.45W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176298contigH-elongata_contig176298:19..855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176298.4608.1mRNA_H-elongata_contig176298.4608.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176298 19..855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176298.4608.1 ID=prot_H-elongata_contig176298.4608.1|Name=mRNA_H-elongata_contig176298.4608.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp
GGKDVGGYTAPSPGERKPLQLQSRTAPPRLPPISAKEPEKTAPAPAPKPS
GPRSNPFGAAQAVDTTQRDKEIEAKLEAERQSSVRRRDETVRSSGKPDIA
AGDSNREETGVGYEGDEAKPEANSKNAEVEGSERGGEKPAPQRPVGRWAA
LRREGGGDDRLNHSVGGFSRRDREDDRRGGGFGRDDRSSFGRRNDGDTGP
SGGGFSSSRMEREPVQPPAPPAGNAFAKRFGSNFDRDLDRTYPRPSGGMG
GGGGGFDRRDDDRRSGM
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