prot_H-elongata_contig175495.4576.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175495.4576.1
Unique Nameprot_H-elongata_contig175495.4576.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
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BLAST of mRNA_H-elongata_contig175495.4576.1 vs. uniprot
Match: D8LCN8_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 6.310e-6
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   67 EEERMEYRVLASVGNPACGGLDMDYLVARALL 98
            E + MEYRV AS G+ ACGGLDMDYLVARALL
Sbjct:  398 EAQGMEYRVRASAGDSACGGLDMDYLVARALL 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175495.4576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN8_ECTSI6.310e-678.13Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175495contigH-elongata_contig175495:443..781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175495.4576.1mRNA_H-elongata_contig175495.4576.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175495 443..808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175495.4576.1 ID=prot_H-elongata_contig175495.4576.1|Name=mRNA_H-elongata_contig175495.4576.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MGASFLDVAVISPNASPDANPKTSVDASSPSASRGGVGGDGGAGAGITSS
KKKKRKGGGKGNSGGSEEERMEYRVLASVGNPACGGLDMDYLVARALLVR
*
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