prot_H-elongata_contig17533.4572.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17533.4572.1
Unique Nameprot_H-elongata_contig17533.4572.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length260
Homology
[Close]
BLAST of mRNA_H-elongata_contig17533.4572.1 vs. uniprot
Match: D8LTR1_ECTSI (Kinesin light chain-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR1_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.130e-13
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0 
Query:    1 ISAAEKRRHREQEVRKGLERAELELGPVHPTVAALLFLLSRVVQERGDYAEAEDLCARAVDVYE 64
            +S+AE+ R RE EVR  L RAE E+G  HP VA LLFLLSR+VQERGDY EAE+LC RA+ +YE
Sbjct:  297 VSSAERER-REVEVRDALVRAEGEVGGEHPRVATLLFLLSRIVQERGDYTEAEELCTRALSIYE 359
[Close]
BLAST of mRNA_H-elongata_contig17533.4572.1 vs. uniprot
Match: A0A431L2N7_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A431L2N7_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 3.200e-7
Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 0 
Query:   20 RAELELGPVHPTVAALLFLLSRVVQERGDYAEAEDLCARAVDVYEKTLGPEHPDVGMVLNCLALSWQAQARNLRLEEAEALHRLTLEIAQKANGSDH 116
            RA      + P +A+ L L S V+ + G  AEA+ +C R +  YE TL P H D+G++ N LA+ + A  +    E AE L++  LEI     G+ H
Sbjct:  289 RATETFDQLDPRIASTLELYSEVLWKNGKLAEAQPVCERTLQFYESTLPPNHQDIGVIANNLAMLYHALEQP---ELAEPLYKRALEIRTANQGTTH 382
[Close]
BLAST of mRNA_H-elongata_contig17533.4572.1 vs. uniprot
Match: D7FLX3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX3_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 6.870e-6
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   96 EAEALHRLTLEIAQKANGSDHIASAYSLHGLAVLAQAKGDFD 137
            EAE LH+  L+IA+   G  H  +AYSLHGLAVLAQA+G FD
Sbjct:    2 EAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFD 43
[Close]
BLAST of mRNA_H-elongata_contig17533.4572.1 vs. uniprot
Match: A0A3S0FX92_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A3S0FX92_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.940e-5
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0 
Query:   30 PTVAALLFLLSRVVQERGDYAEAEDLCARAVDVYEKTLGPEHPDVGMVLNCL 81
            P +   L  L+ ++ ++G YA+AE LC R + +YE+T+GP HPDVG++ N L
Sbjct:   43 PRLTVTLECLAELLFKQGKYAQAEPLCERTLQIYERTIGPTHPDVGILANNL 94
[Close]
BLAST of mRNA_H-elongata_contig17533.4572.1 vs. uniprot
Match: A0A838DUT1_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Ktedonobacteraceae bacterium TaxID=2740538 RepID=A0A838DUT1_9CHLR)

HSP 1 Score: 50.4 bits (119), Expect = 6.490e-5
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:   25 LGPVHPTVAALLFLLSRVVQERGDYAEAEDLCARAVDVYEKTLGPEHPDVGMVLNCLALSWQ 86
            +GP HP  A  L  L+ +   +G+Y EA  L  RA+ +Y+K LGP+HP+  +V N   L  Q
Sbjct:    1 MGPEHPGTATSLNNLALLYSNQGNYEEALPLYQRALAIYKKVLGPDHPNTILVQNSYTLLQQ 62
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17533.4572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTR1_ECTSI4.130e-1365.63Kinesin light chain-like protein n=2 Tax=Ectocarpu... [more]
A0A431L2N7_9BACT3.200e-736.08Tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
D7FLX3_ECTSI6.870e-661.90TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A3S0FX92_9BACT1.940e-544.23Tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
A0A838DUT1_9CHLR6.490e-540.32Tetratricopeptide repeat protein n=1 Tax=Ktedonoba... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availablePFAMPF13374TPR_10coord: 39..73
e-value: 1.0E-8
score: 34.8
coord: 91..116
e-value: 0.0072
score: 16.2
NoneNo IPR availablePFAMPF13424TPR_12coord: 203..260
e-value: 4.0E-12
score: 46.3
coord: 123..193
e-value: 2.3E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 95..244
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 18..116
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 18..116
coord: 95..244
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 202..222
score: 55.24
coord: 237..258
score: 33.64
coord: 158..175
score: 54.44
coord: 93..111
score: 35.79
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 162..195
e-value: 0.0037
score: 26.5
coord: 33..66
e-value: 42.0
score: 9.5
coord: 120..153
e-value: 0.015
score: 24.5
coord: 204..237
e-value: 98.0
score: 6.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 33..66
score: 6.638
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 120..153
score: 9.027
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 162..195
score: 8.467
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..90
e-value: 5.8E-18
score: 66.9
coord: 91..260
e-value: 2.3E-50
score: 173.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 115..260
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 27..154
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 33..66
score: 7.341
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 120..237
score: 14.515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17533contigH-elongata_contig17533:83..4810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17533.4572.1mRNA_H-elongata_contig17533.4572.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17533 83..4810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17533.4572.1 ID=prot_H-elongata_contig17533.4572.1|Name=mRNA_H-elongata_contig17533.4572.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp
ISAAEKRRHREQEVRKGLERAELELGPVHPTVAALLFLLSRVVQERGDYA
EAEDLCARAVDVYEKTLGPEHPDVGMVLNCLALSWQAQARNLRLEEAEAL
HRLTLEIAQKANGSDHIASAYSLHGLAVLAQAKGDFDEAESLFRQALAID
EEAHGARHPEVASRLNSLAALLQTRGRYDEAEAIFTRALEVDEACFGLEH
PRVAAGLHNLAALLQAQGKHAEADRLQTRALETWEREYGPEHPKLAAFLN
NQATLRLAQG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom