prot_H-elongata_contig175324.4571.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Match: D8LST7_ECTSI (Putative type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI) HSP 1 Score: 101 bits (252), Expect = 1.730e-23 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 1 AAVAPSSTLRHCDGLDVVRKGSRGRGRQLMILPGMLGLGKSAVGGKLGTLKEVTSASPVLYIEFPDVR-GCT 71
AA+APSSTLR CDGL+VV+ +RGRGRQLM+LPG LGLG + GGKLGTL T A+PVLY+EFP+ R CT
Sbjct: 67 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCT 138
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Match: A0A6H5JPN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.420e-23 Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 1 AAVAPSSTLRHCDGLDVVRKGSRGRGRQLMILPGMLGLGKSAVGGKLGTLKEVTSASPVLYIEFPDVR-GCT 71
AA+APSSTLR CDGL+VV+ +RGRGRQLM+LPG+LGLG + GGKLGTL A+PVLY+EFP+ R CT
Sbjct: 78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCT 149
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Match: A0A7S3Z848_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z848_9EUKA) HSP 1 Score: 52.8 bits (125), Expect = 6.680e-7 Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0
Query: 5 PSSTLRHCDGLDVVRKG-SRGRGRQLMILPGMLGLGKSAVGGKLGTLKEVTSASPVLYIEFPDVR 68
P + L++ DG ++ K SRGR R L +LPG L + + GGK GTL V S +PVLY+E+P R
Sbjct: 24 PKALLKY-DGANINNKSASRGRSRFLFVLPGKLDVQNT--GGKFGTLSNVMSQNPVLYVEYPQGR 85
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Match: A0A7S0S0U2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S0U2_9CHLO) HSP 1 Score: 50.8 bits (120), Expect = 5.080e-6 Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 6 SSTLRHCDGLDVVRKGSRGRGRQLMILPGMLGLGKSAVGGKLGTLKEVTSASPVLYIEFPDVR 68
S L +G+D++++GS + R L+I+ +L A GKLGTL ++ S SPV+Y++FP R
Sbjct: 40 SKGLIKANGMDIIKRGSNRKNRYLIIMNCLLA---PAAAGKLGTLAQLDSKSPVMYMDFPQGR 99
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Match: A0A4D9D0I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0I6_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 6.200e-6 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 1 AAVAPSST----LRHCDGLDVVRKGSRGRGRQLMILPGMLGLGKSAVGGKLGTLKEVTSASPVLYIEFPDVR 68
A + PSS LR DG D+VRKG++ + R + ILP ++ + + GGKLGT+ ++ + +PVLY++F R
Sbjct: 42 AKLVPSSIRVKDLRRWDGCDIVRKGAK-KTRYVFILPAIMTI--TQAGGKLGTIAQMDTETPVLYLDFTQGR 110
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Match: A0A250XN82_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XN82_9CHLO) HSP 1 Score: 51.6 bits (122), Expect = 8.500e-6 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 6 SSTLRHCDGLDVVRKGSRGRGRQLMILPGMLGLGKSAVGGKLGTLKEVTSASPVLYIEFPDVR 68
S L C+G D+V+K S + R L+++ L A G++GTL + S +PV+Y+EFP R
Sbjct: 52 SKALTKCNGYDIVKKSSARKSRYLVVINAQLA---PAAAGRMGTLSNLDSKNPVMYLEFPQGR 111 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175324.4571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig175324.4571.1 ID=prot_H-elongata_contig175324.4571.1|Name=mRNA_H-elongata_contig175324.4571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|