prot_H-elongata_contig17532.4570.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig17532.4570.1
Unique Name	prot_H-elongata_contig17532.4570.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	333

Homology

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A6H5LEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEZ0_9PHAE)

HSP 1 Score: 637 bits (1642), Expect = 8.430e-217
Identity = 322/343 (93.88%), Postives = 326/343 (95.04%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPP+QTMVSAMENLYALGALDEEG           FPLEPQLSKMLI     TSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWK SKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKM+ILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFY++ADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG
Sbjct:  963 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPLQTMVSAMENLYALGALDEEGLLTRLGRKMAEFPLEPQLSKMLI-----TSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKTSKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMDILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYKSADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 1300

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A835YV72_9STRA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV72_9STRA)

HSP 1 Score: 615 bits (1586), Expect = 3.960e-208
Identity = 308/343 (89.80%), Postives = 322/343 (93.88%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTE AYK EML SS+PEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPI T+VSAME+LYALGALDEEG           FPLEPQLSKMLII     SVELGCAEEILTIV+MLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKA+KFSNPWCYENF+QARSMRR+QDVRKQLVSIMDRYKM+I++AGRNYNKVRRAIVSGYFTHAAKKDP+EGY TMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRN+MTIEPKWLVELAPQFY+AADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKR+G
Sbjct:  991 QASARQRAGRAGRTGPGKCYRLYTEVAYKSEMLPSSIPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIGTLVSAMESLYALGALDEEGLLTRLGRKMAEFPLEPQLSKMLII-----SVELGCAEEILTIVSMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKANKFSNPWCYENFIQARSMRRAQDVRKQLVSIMDRYKMDIVSAGRNYNKVRRAIVSGYFTHAAKKDPKEGYMTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNVMTIEPKWLVELAPQFYQAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRRG 1328

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A7R9UAC0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAC0_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 3.700e-192
Identity = 273/343 (79.59%), Postives = 307/343 (89.50%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTE AY+ EML SSVPEIQRT+LGNVVLQLKAMGI DL+GFDFMDPPP+QT++ AMENL+ALGALDEEG           FPLEPQLSKMLI     TSV+  C+EEILTI++MLSVE+PFYRPK+KQ QAD KKAKF QPEGDHLTLLAVY+AW  S FSNPWCYENF+QAR+MRR+QD+RKQLV IMD YKM+IL+AGRNY K++RAIV+GYFT+AAKKDPQEGYRTMVEGN VYIHPSSALFNKSPEWVLYHE+VLTTKEYMRNIM+IEPKWLVELAP FYR ADP K+TRQKRM++IEPL+DR+NPP+SWRLS+R+G
Sbjct:  459 QASARQRAGRAGRTGPGKCYRLYTEIAYRTEMLPSSVPEIQRTSLGNVVLQLKAMGIKDLVGFDFMDPPPMQTLIGAMENLFALGALDEEGLLTRLGRRMAEFPLEPQLSKMLI-----TSVQFRCSEEILTIISMLSVESPFYRPKDKQGQADSKKAKFHQPEGDHLTLLAVYDAWAKSNFSNPWCYENFIQARAMRRAQDIRKQLVPIMDNYKMDILSAGRNYQKIQRAIVAGYFTNAAKKDPQEGYRTMVEGNVVYIHPSSALFNKSPEWVLYHEVVLTTKEYMRNIMSIEPKWLVELAPNFYRKADPTKLTRQKRMERIEPLFDRYNPPDSWRLSRRRG 796

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A7S2MKF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MKF0_9STRA)

HSP 1 Score: 565 bits (1457), Expect = 6.060e-191
Identity = 274/343 (79.88%), Postives = 309/343 (90.09%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QAS RQRAGRAGRTGPGKCYRLYTE A++ EML SS+PEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPP+QTMV AME+L++LGALD+EG           FPLEPQLSKMLI+     SV+L C EEILTIVAMLSVENPFYRPK+KQAQADMKKAKFFQPEGDHLTLLAV+E WK +KFSNPWCYEN++QAR+MRR+QDVRKQL SI+DRYKM+I++AGRNY KV+R+I +GYFT+AAKKDPQEGYRTMVEGNPVYIHPSSALFNK+PEW++YHELV+TTKEYMR +M IEPKWLVELAPQF+RAADP +MT+ KRM KIEPLYDRFNPPN WRLS+R+G
Sbjct:  801 QASCRQRAGRAGRTGPGKCYRLYTEQAFRTEMLPSSIPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPVQTMVGAMESLFSLGALDDEGLLTRLGRKMAEFPLEPQLSKMLIV-----SVDLACTEEILTIVAMLSVENPFYRPKDKQAQADMKKAKFFQPEGDHLTLLAVWEGWKIAKFSNPWCYENYLQARAMRRAQDVRKQLTSILDRYKMDIVSAGRNYKKVQRSITAGYFTNAAKKDPQEGYRTMVEGNPVYIHPSSALFNKNPEWLIYHELVMTTKEYMRAVMAIEPKWLVELAPQFFRAADPTRMTKAKRMMKIEPLYDRFNPPNMWRLSRRRG 1138

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: I2CR50_NANGC (ATP-dependent RNA helicase DHX8/PRP22 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR50_NANGC)

HSP 1 Score: 552 bits (1423), Expect = 5.470e-188
Identity = 268/343 (78.13%), Postives = 307/343 (89.50%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASA+QR+GRAGRT PGKCYRLYTE A+  EML +SVPEIQR NLGNVVLQLKAMGINDLLGFDFMDPPP+ T++SAM+NLY LGALDEEG           FPLEPQLSK+LI     TSVELGC +EILTIVAMLSVE PFYRPKEKQAQADMKKAKFFQ EGDHLTLLAVYE WK +KFSNPWC+ENF+QAR+M+R+QDVRKQLV+I+DRYKM+IL+AGRNY K+++AI SGYFTH AKKDPQEG++T+V+ N VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLV+LAP+F++AADP+K+T+ KRMQKIEPLYDRFNPPNSWRLS+RKG
Sbjct:  619 QASAQQRSGRAGRTMPGKCYRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILI-----TSVELGCTDEILTIVAMLSVETPFYRPKEKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNYKKIQQAICSGYFTHVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVQLAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSRRKG 956

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: B7FYK9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYK9_PHATC)

HSP 1 Score: 530 bits (1365), Expect = 1.200e-186
Identity = 258/343 (75.22%), Postives = 305/343 (88.92%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTE+A+K EML +++PEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPP+ T+V A+E+L+ALGALDEEG           FPLEP LSKMLI+     SV+LGC+EEILTI AMLSVENPFYRP++KQAQ+DMKKAKF Q EGDHLTLLAVY+AW+ASKFSNPWC+ENFVQARSMRR+QDVRKQLV+IMDRY++ +++AG+NY  + +AI +G+FT+AAKKDPQEGYRT+V+ NPVYIHPSSA+FNK+PE+V+YHELVLTTKEYMRNI+ I+ KWL ELAP FY+ ADPN++T+ KR +KIEPL+DRFNP +SWRLSKRKG
Sbjct:   85 QASARQRAGRAGRTGPGKCYRLYTENAFKTEMLPTNIPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPVATLVGALESLHALGALDEEGLLTRLGRKMAEFPLEPNLSKMLIL-----SVDLGCSEEILTITAMLSVENPFYRPRDKQAQSDMKKAKFHQAEGDHLTLLAVYKAWEASKFSNPWCFENFVQARSMRRAQDVRKQLVTIMDRYRLLLISAGKNYKIICKAITAGFFTNAAKKDPQEGYRTLVDQNPVYIHPSSAVFNKNPEYVIYHELVLTTKEYMRNILVIDAKWLYELAPSFYKQADPNRITKTKRKEKIEPLHDRFNPKDSWRLSKRKG 422

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A7S2S7U2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7U2_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 1.870e-184
Identity = 253/343 (73.76%), Postives = 302/343 (88.05%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKC+RL+TE AYK EML +++PEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPP+ T+V AME+L+ALG+LD+EG           FPLEP LSKML++     SV+LGC++EILTI ++LSVENPFYRPK+KQAQADMKKAKF Q EGDHLTLL VY+ W+A+KFSNPWC+ENF+QARSM+R+QDVRKQLV+IMDRYK++IL+AG+NY  + +AI +G+F +AAKKD QEGYRT+V+ NPVYIHPSS+++NKSPE+V+YHELVLTTKEYMRNIM I+ KWL ELAP FYR ADPNK+T+ KRMQKIEPL+DRFNP +SWRLS+RKG
Sbjct:   40 QASARQRAGRAGRTGPGKCFRLFTELAYKNEMLPTNIPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPVATLVGAMESLHALGSLDDEGLLTRLGRKMAEFPLEPNLSKMLLL-----SVDLGCSDEILTITSLLSVENPFYRPKDKQAQADMKKAKFHQAEGDHLTLLTVYKGWEAAKFSNPWCFENFIQARSMKRAQDVRKQLVTIMDRYKLDILSAGKNYQIICKAITAGFFPNAAKKDAQEGYRTLVDQNPVYIHPSSSVYNKSPEFVIYHELVLTTKEYMRNIMAIDAKWLTELAPAFYRQADPNKLTKAKRMQKIEPLHDRFNPADSWRLSRRKG 377

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: K3WHT1_GLOUD (RNA helicase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WHT1_GLOUD)

HSP 1 Score: 541 bits (1395), Expect = 6.880e-184
Identity = 263/343 (76.68%), Postives = 304/343 (88.63%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTE+AYK EML ++VPEIQR NLG+VVLQLKAMGINDL+GFDFMDPPP Q +V A+ENLY LGALD+EG           FP+EP+ +K+L+     TSV LGCAEE+LTIVAMLSVE  F+RPKEKQAQAD KKAKF QPEGDHLTLLAVYEAWK SKFSNPWC++NF+QAR++RR+QDVRKQL+SI+DRYKM++++ G+N+NKVRRAIV+GYF + AKKDPQEGYRTMVEG PVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTI+PKWLVELAP F++  DP K+T++KR +KIEPLYDRFNPP++WRLSKR+G
Sbjct:  610 QASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQQALVMALENLYGLGALDDEGLLTRLGKKMAEFPVEPKNAKVLL-----TSVVLGCAEEVLTIVAMLSVETVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWKNSKFSNPWCFDNFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNFNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIDPKWLVELAPAFFKKGDPTKLTKRKRNEKIEPLYDRFNPPDAWRLSKRRG 947

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A7S2JV85_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JV85_9STRA)

HSP 1 Score: 547 bits (1409), Expect = 3.950e-183
Identity = 264/343 (76.97%), Postives = 309/343 (90.09%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTE AYK EMLS+++PEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPP+ T+V AME+L+ALGALD+EG           FPLEP LSKML++     SV+LGC++EILTI AMLSVENPFYRPK+KQAQADMKKAKF Q EGDH+TLL+VY+AW+A+KFSNPWC+ENF+QARSM+RSQDVRKQLV+IMDRYK+++++AG+NY K+  AI +G+FT+AAKKDPQEGYRT+V+ NPVYIHPSSALFNK+PEWV+YHELVLTTKEYMRNIM I+ KWL+ELAP FY++ADP KMTRQK+M+KIEPL+DRFNP +SWRLSKRKG
Sbjct:  860 QASARQRAGRAGRTGPGKCYRLYTEVAYKNEMLSTNIPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPVATLVGAMESLHALGALDDEGLLTRIGRKMAEFPLEPNLSKMLLL-----SVDLGCSDEILTITAMLSVENPFYRPKDKQAQADMKKAKFHQAEGDHITLLSVYKAWEAAKFSNPWCFENFIQARSMKRSQDVRKQLVTIMDRYKLDVVSAGKNYKKICMAITAGFFTNAAKKDPQEGYRTLVDQNPVYIHPSSALFNKNPEWVVYHELVLTTKEYMRNIMVIDAKWLIELAPAFYKSADPTKMTRQKKMEKIEPLHDRFNPKDSWRLSKRKG 1197

[Close]

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Match: A0A1E7FST2_9STRA (Putative ATP-dependent RNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FST2_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 2.280e-182
Identity = 256/343 (74.64%), Postives = 302/343 (88.05%), Query Frame = 0

Query:    1 QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEG-----------FPLEPQLSKMLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFFQPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIMDRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADPNKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG 332
            QASARQRAGRAGRTGPGKCYRLYTE A+K EMLS++VPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPP+ T+V A+E LYALGALDEEG           FPLEP LSKMLI+     SV+LGC+EEILTI +MLSVE+PFYRPK+KQ+QADM+KAKF Q EGDHLTLLAVY+ W+A+KFS+PWC+ENF+ ARSM+R+QDVRKQLV+IMDRY++ +++AG+NY  + RAI +G+FT+ AKKDPQEGYRT+V+ NPVYIHPSSALFNK+PE+V+YHELVLTTKEYMRNIM I+ KWL ELAP FY++ADPNK+T+QKR +KIEPL DRFNP +SWRLS+RKG
Sbjct:  270 QASARQRAGRAGRTGPGKCYRLYTEHAFKTEMLSTNVPEIQRTNLGNVVLQLKAMGINDLLGFDFMDPPPVATLVMALETLYALGALDEEGLLTRLGRKMAEFPLEPNLSKMLIL-----SVDLGCSEEILTITSMLSVESPFYRPKDKQSQADMRKAKFHQAEGDHLTLLAVYKGWEAAKFSSPWCFENFITARSMKRAQDVRKQLVTIMDRYRLLLISAGKNYKLICRAITAGFFTNTAKKDPQEGYRTLVDQNPVYIHPSSALFNKNPEYVIYHELVLTTKEYMRNIMVIDAKWLTELAPNFYKSADPNKITKQKRFEKIEPLVDRFNPKDSWRLSRRKG 607

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot

BLAST of mRNA_H-elongata_contig17532.4570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LEZ0_9PHAE	8.430e-217	93.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YV72_9STRA	3.960e-208	89.80	Putative pre-mRNA-splicing factor ATP-dependent RN...	[more]
A0A7R9UAC0_9STRA	3.700e-192	79.59	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S2MKF0_9STRA	6.060e-191	79.88	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
I2CR50_NANGC	5.470e-188	78.13	ATP-dependent RNA helicase DHX8/PRP22 n=1 Tax=Nann...	[more]
B7FYK9_PHATC	1.200e-186	75.22	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
A0A7S2S7U2_9STRA	1.870e-184	73.76	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
K3WHT1_GLOUD	6.880e-184	76.68	RNA helicase n=2 Tax=Pythiaceae TaxID=4782 RepID=K...	[more]
A0A7S2JV85_9STRA	3.950e-183	76.97	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A1E7FST2_9STRA	2.280e-182	74.64	Putative ATP-dependent RNA helicase n=1 Tax=Fragil...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 76..160 e-value: 3.3E-23 score: 93.1
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 77..159 e-value: 5.1E-13 score: 49.2
None	No IPR available	GENE3D	1.20.120.1080		coord: 150..211 e-value: 4.1E-6 score: 28.5
None	No IPR available	GENE3D	3.40.50.300		coord: 1..36 e-value: 1.7E-11 score: 45.9
None	No IPR available	PANTHER	PTHR18934:SF120		coord: 1..331
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 1..331
IPR042035	DEAH helicase, winged-helix domain	GENE3D	1.10.10.2130		coord: 37..82 e-value: 8.6E-23 score: 81.7
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 217..293 e-value: 1.1E-23 score: 83.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..203

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig17532	contig	H-elongata_contig17532:454..7220 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig17532.4570.1	mRNA_H-elongata_contig17532.4570.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig17532 454..7220 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig17532.4570.1 ID=prot_H-elongata_contig17532.4570.1|Name=mRNA_H-elongata_contig17532.4570.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=333bp
QASARQRAGRAGRTGPGKCYRLYTESAYKQEMLSSSVPEIQRTNLGNVVL
QLKAMGINDLLGFDFMDPPPIQTMVSAMENLYALGALDEEGFPLEPQLSK
MLIIRHEITSVELGCAEEILTIVAMLSVENPFYRPKEKQAQADMKKAKFF
QPEGDHLTLLAVYEAWKASKFSNPWCYENFVQARSMRRSQDVRKQLVSIM
DRYKMEILTAGRNYNKVRRAIVSGYFTHAAKKDPQEGYRTMVEGNPVYIH
PSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPQFYRAADP
NKMTRQKRMQKIEPLYDRFNPPNSWRLSKRKG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007502	Helicase-assoc_dom
IPR042035	DEAH_win-hel_dom
IPR011709	DUF1605
IPR027417	P-loop_NTPase