prot_H-elongata_contig17521.4564.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17521.4564.1
Unique Nameprot_H-elongata_contig17521.4564.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length337
Homology
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: D7G030_ECTSI (EXS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G030_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 1.730e-180
Identity = 250/336 (74.40%), Postives = 284/336 (84.52%), Query Frame = 0
Query:    1 SGPRVAIEDDEPEDTTRKDKPHRVPVPPSWRQVVTTSGVFLGILLACIYGSRLLLVPPTVAVGGFYFILGVALLVPLQAPSVRDHTSLFFTSLAGVFFPATDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGVQYPGWCFRLIPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKHWGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARLADRWLRRTDLVLTLELIEVLRRSMWNVFRLEWECVQCLGGARPLRLDKGSEALKL 336
            SGPR+A ED    DT+ K KP RVP PPSWRQVV+T+  FLG+LLACI+GSR+L VPPTVAVGGFYFILG ALLVPLQAPSVR HT+LFFTSLAGVFFPATD+H +EVLVADALTSLSRVFADVAVTFLLV +GWG++YPGW F   PCVFAS PYWVRVRQC  QL  EVD +R+ LL INVGKY+SAFPVIWLTGYQAMR   G      +G  I+AAAL NS+YSFAWDVKMDWGLGQ G++ WGLRNTLLI  E PWPYY AVA+DL+LRLTW+ARLA+   R  D+VLTLEL+E+LRRSMWNVFRLEWEC+QCLGGA+ +RLDKGS+AL++
Sbjct:   50 SGPRLATEDQG--DTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPGVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAKAVRLDKGSDALRV 383          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: A0A835YVP0_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP0_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.810e-59
Identity = 127/290 (43.79%), Postives = 164/290 (56.55%), Query Frame = 0
Query:   32 QVVTTSGVFLGILLACIYGSRLLLVPPTVAVGGFYFILGVALLVPLQAPSVRDHTSLFFTSLAGVFFPATDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGVQYP-GWCFRLIPCVFASC-PYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKHWGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARLADRW--LRRTDLVLTLELIEVLRRSMWNVFRLEWECVQ 317
            Q+V  SG  L +LL C+    L  + P VAVG F  ++G+ LLVP+Q+ ++RD  +   +++  V  P++D+   EVLVADAL SLSRVF+D  +  L++   W    P     R+      +C P  +RVRQCA     E D  RRRL  +N+GKY+S  P + L    A+      +    L     AAA FN+ Y  AWDV+MDWGLG  GAK  GLR TLL+    P  YYAA+A D  LR  W+  LA     L  TDL L LEL+EV RR MW V RLEWE VQ
Sbjct:   90 QLVLGSGFLLALLLLCLRIGELAQIMPNVAVGAFAIMVGLMLLVPMQS-AMRDGLNFLLSTVGRVLCPSSDVPFVEVLVADALCSLSRVFSDAGLAILVLAATWTSSAPPSQVTRVFVTATLACLPAVLRVRQCAILHFAEPDPARRRLHALNIGKYLSTLPPVLLGALHALAPPA--LDGVPLATAAAAAAAFNTAYCLAWDVRMDWGLGDLGAKAAGLRPTLLLGAHAP--YYAAIAADAALRCAWVRPLAALGYALALTDLTLVLELVEVCRRCMWAVLRLEWEAVQ 374          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: W7TLW9_9STRA (Protein-er retention protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 5.560e-42
Identity = 115/318 (36.16%), Postives = 164/318 (51.57%), Query Frame = 0
Query:   31 RQVVTTSGVFLGILLACIY-GSRLLLVPPTVAVGGFYFILGVALLVPLQAPSV-RDHTSLFFTSLAGVFFPATDIHLSEVLVADALTSLSRVFADVAVTFL--LVGRGWGVQYPGWCFRLI-----PCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQ---PGA-----------KHWGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARLA--DRWLRRTDLVLTLELIEVLRRSMWNVFRLEWECVQCLGGAR 323
            R+V+    V +  ++ CI   S LL  P   A   FYF+L  A++ P     + R+   LF   L  V  P T+IH  EVLV D LTSLS+VF +V +T +  L+    G+      FR++     P + AS P+ +R+RQC  Q       + R L+ +N+ KY S+ P +WL    A         +  +   ++   L NS+YSF WDV MDWGLG     GA           +HWGLR TLL        YYAA+ LDL+LRL W+ +    D  L     +L +E +EVLRR +W+++R+EWEC+   GG +
Sbjct:  114 RKVINLVTVLVLAMVFCILIMSELLGQPYQHAPFIFYFLLLAAVIYPSDTTLMFRELALLFGRVLWLVVLPGTEIHFLEVLVGDILTSLSKVFFEVGLTCVATLLSLSPGL------FRIVSPDIFPTLLASTPFILRIRQCVVQRRGTASGKARFLVSLNILKYCSSIPGLWLPLLLAPHYS-----TYQIERVLLVVLLVNSLYSFLWDVIMDWGLGHVKLTGAPKKGGGGAVRLRHWGLRPTLLFGSAGS--YYAAIGLDLVLRLVWVLKYVNFDHRLSYDKFMLLIECLEVLRRGIWSIYRIEWECLSINGGRK 418          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: A0A0L0FR54_9EUKA (EXS domain-containing protein (Fragment) n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR54_9EUKA)

HSP 1 Score: 128 bits (322), Expect = 1.270e-30
Identity = 80/227 (35.24%), Postives = 123/227 (54.19%), Query Frame = 0
Query:   98 FPATDIHLSEVLVADALTSLSRVFADVAVTFLLVG---RGWGVQ--YPGWCFRLIPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKHWGLRNTLLISPEDPWP-YYAAVALDLLLRLTWLARLADRW-LRRTDLVLTLELIEVLRRSMWNVFRLEWECVQ 317
            FP   I  +EV +AD LTSLS+VFAD    F  VG     W V    PG    L   +  S PY +R+RQC      E  A   +  ++N  KY SA+P IWL     M   G    S  L +  + A++ N++Y++ WD+  DWGL    + ++ LR  +++    P P YY  + +DL+LR  W  +L++   L   D ++  EL+E++RR++WN+ R+E+EC++
Sbjct:   98 FPGARISFAEVFIADGLTSLSKVFADFEQIFCFVGYHVHQWDVYDASPGCMSSLFLPIVVSIPYTIRLRQCLI----EYRAAGVQKDLVNAFKYASAYPPIWLGHALKMAPTG---QSPTLYSAWILASVVNTMYTYYWDLVWDWGLFDRTSPNYPLRARMML----PRPLYYMWILIDLILRCVWSVQLSNLLRLNSADKIILFELLEIIRRALWNIVRVEYECIK 313          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: A0A4P9XQW3_9FUNG (EXS family-domain-containing protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQW3_9FUNG)

HSP 1 Score: 122 bits (307), Expect = 1.320e-28
Identity = 89/253 (35.18%), Postives = 123/253 (48.62%), Query Frame = 0
Query:   83 RDHTSLFFTSLAGVFFP--ATDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGV--------QYPGWCFRLIPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQ---PGAKHWGLRNTLL---ISPEDPWPYYAAVALDLLLRLTWLARLADRWLRRTDLV---LTLELIEVLRRSMWNVFRLEWECV 316
            R     F  SL  + F   A+ +HL++V++AD LTS +RV AD+ V    V     +        Q     +  +  V  + PY +R++QC  + A   D   RR  + N  KY SAFPVI L+  Q +R    +     +  C+    LFNS YSF WDV +DW LG    P    W +    L   +   +P  YY A+ LD LLR TW  +L+   LR  +L      LE +EV+RR +W  FRLE E V
Sbjct:   95 RHKRFCFLRSLGRIIFGGLASPVHLADVVLADILTSFARVLADLYVVLCYVVTASSLDLAIHSLEQSTTCVYSWVGPVLVALPYMLRLKQCLIEAAQSRDWPSRRRHLANALKYASAFPVIILSAVQRLRSSDSIRAWENMFVCV----LFNSFYSFYWDVAVDWQLGPLSLPLTPQWEVHARYLRPMLHFSEPSIYYLAIVLDFLLRFTWSLKLSTH-LRLDELTAGGFVLEWLEVVRRWLWVYFRLEREWV 342          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: F2UM19_SALR5 (EXS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UM19_SALR5)

HSP 1 Score: 123 bits (308), Expect = 1.430e-28
Identity = 79/241 (32.78%), Postives = 123/241 (51.04%), Query Frame = 0
Query:   89 FFTSLAGVFFPATDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGVQYPGWCFR----LIPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTG--YQAMRQDGGVITS--SVLGNCIVAAALFNSIYSFAWDVKMDWGLGQ-PGAKHWGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARLADRWLRRTD---LVLTLELIEVLRRSMWNVFRLEWECVQ 317
            FF      FF  +++   +VL ADALTS+S++ AD+ +    +     + +     R    ++  V AS PY +R  QC     +   +      ++N+GKY+S+FPVIW +   +Q    +G  +      L    +     N++YS+ WD+ MDWGL + P AKH  LR+ L    + PW YY A+A DL LRL W  +L+    +           E++EV RR +WN FR+EW+ +Q
Sbjct:  108 FFYERLHTFFTFSEVKFVDVLTADALTSMSKLLADMQIVVCSIVGVLSLNFDAGNTRCMHSVVAPVLASLPYLIRAIQCYRAYLSTGSSHH----LVNLGKYLSSFPVIWTSALKHQLAPVEGVRLDKHDQYLQLLWLYTVTINTLYSYLWDILMDWGLCRSPRAKHVLLRDDLHF--KRPWLYYTAMAGDLALRLCWSLKLSSHLQQHASGQAFAFLFEVLEVFRRFVWNFFRVEWQYIQ 342          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: A0A7S1IAN5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IAN5_9EUGL)

HSP 1 Score: 124 bits (310), Expect = 1.880e-28
Identity = 96/311 (30.87%), Postives = 146/311 (46.95%), Query Frame = 0
Query:   31 RQVVTTSGVFLGILLACIYGSRLLLVPPTVAVGGFYFILGVALLVPLQAPSVRDHTSLFFTSLAGVFFPATDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGVQYPGWCFRL-----IPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVIT-SSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKHWGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARLADRW-----LRRTDLVLTLELIEVLRRSMWNVFRLEWECVQCLGGARPLRLDKG 330
            R V  T+ +F  +LLA I         P+  +    +I  + LL   ++P      +L     + +  P T +    V++AD LTS S+VFAD+  T  ++       +     +      I  + AS P W+R+ QC    +T  D  RR LL  N  KY +AFPV++   +  ++Q          L    + +   NS+YSF WD+  DWGLG   + +  LR+ L+      W YYA +  DLLLR TW  +L+  W     + R   +  LE +E+ RR MW  FR EW+ +     + P+R DKG
Sbjct:  120 RTVYCTASLFTVVLLANIVTFTQARGIPSTFIPLCLYISMLLLLCWPKSPFHNARYALLQALQSVMLSPFTGVAFVHVILADLLTSYSKVFADMYGTVCVISNSTDRHFHASILQACRNDPIGPIVASLPSWLRLFQCLKAYST--DGERRHLL--NALKYSTAFPVLF---FSYLKQGPSAEAWGPQLSQLWLLSVFVNSLYSFYWDIYYDWGLGSISSSNLLLRDRLVFPKR--WWYYATMVTDLLLRFTWSLQLSPHWWFIGSVGREFKMFVLEAVEIFRRCMWIFFRCEWQHI-----SHPIREDKG 416          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: A0A7S1MLS0_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MLS0_ALECA)

HSP 1 Score: 118 bits (296), Expect = 1.290e-27
Identity = 93/281 (33.10%), Postives = 134/281 (47.69%), Query Frame = 0
Query:   78 QAPSVRDHTSLFFTSLAGVFFP--ATDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGVQYPG-W-------------------CFRL-IPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQAMRQDGGVITS-SVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPG---AKHWGLRNTLLISPEDPWPYYAAVALDLLLRLTW-------LARLADRWLRRTDLVLTLELIEVLRRSMWNVFRLEWECVQCLGGARP 324
            +AP  R   + F  +L   F+P  A +    +VLVAD LTSL+R F D+A+      +  G   PG W                   C R  +P V  + P+ VR RQC        +A  R+L ++N+ KY+SA P++ L   +A   +G  I     LG   + A + N+++S+ WD+ MDWGL  P    +  +GLR  LL+  E    YY A+A D L R  W         RL   WL         + +EV RR +W+  R+EW+CV+  GG RP
Sbjct:    7 RAPPAR---AAFARALRRCFWPDAAKETPFVQVLVADGLTSLARAFFDIALGSCAALQAAGG--PGAWALTRGAGERPTLLGDALEQCGRSPLPYVAWAAPFLVRARQCWLSSRHAPEALSRQLHLLNLAKYLSALPIVCLAFLRAQASEGEDIEGLEFLG---LLAGVVNTVFSYLWDLAMDWGLLHPAPPLSGRFGLRPVLLLC-EGGGFYYLAIAADALARACWSLRWCPEAVRLGGFWLGSLQ-----QAVEVARRCLWSALRVEWQCVRTGGGPRP 273          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: A0A8K1FNJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNJ1_PYTOL)

HSP 1 Score: 122 bits (306), Expect = 1.470e-27
Identity = 91/286 (31.82%), Postives = 136/286 (47.55%), Query Frame = 0
Query:   64 GFYFILGVALLVPLQAPSVRDHTSLFFTSLAGVFFPATDIHLS---------EVLVADALTSLSRVFADVAVTFLLVGRGW----GVQYPGWCFRL----IPCVFASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGY-QAMRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKH--WGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARLADRWLRRTDLVLTLELIEVLRRSMWNVFRLEWECVQC-LGGARPLRLD 328
            G+ FI G+ L  P      +   S+    L+   +P  +  L          EV +AD LTSLS+   D AV ++L+   +    G     +  ++    +P   AS PY +R  QC         A  R L ++N  KY S+  VI +  Y Q M   G  +  + L    +  A+FNS+YSF WDV MDWGLGQP        LR+ L+  P   W YY  + +D  LR+ W+ +  D      D  +   + EV+RR +WNV R+EW+C++  + G++ L  D
Sbjct:  110 GYCFIAGLLLFCPFDIMHRKCRYSVI-RKLSRCLWPFQNFSLDLPPHPTPFVEVFLADGLTSLSKFIQDSAVAWMLLSLSFSQELGELRTSYVSKMKSSPLPYFAASMPYIIRATQCLISFHRTTSANDRFLHLLNTLKYCSSLLVISVGAYPQIMGHVGVRLEKNTL---FLFCAVFNSLYSFLWDVIMDWGLGQPNLPRRVMFLRHHLIYRPR--WIYYGVIVVDFALRILWVTKWWDWQHFGVDFKMLSMVAEVVRRVIWNVLRVEWQCIKLEILGSKKLSED 389          
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Match: J3NJS2_GAET3 (EXS domain-containing protein n=1 Tax=Gaeumannomyces tritici (strain R3-111a-1) TaxID=644352 RepID=J3NJS2_GAET3)

HSP 1 Score: 121 bits (303), Expect = 1.730e-27
Identity = 97/248 (39.11%), Postives = 125/248 (50.40%), Query Frame = 0
Query:  107 EVLVADALTSLSRVFADVAVT---FLLVGRGWGVQYPG---WCFRLIPCVFASCPYWVRVRQCATQLATEVDARRRRLL------MINVGKYMSAFPVIWLTGYQAMRQDGGVITSS--VLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKH--------WGLRNTLLISPEDPWPYYAAVALDLLLRLTWLARL----ADRWLRRTDLVLTLELIEVLRRSMWNVFRLEWECVQCLGGARPLRLD 328
            ++L+AD LTS SRV AD+ V    FL  G       P         +P + A  PY +R+RQC T+      A  +  +      + N  KY +AFPVI L    A  + G   TSS  +LG   VAA L NS+YSF WDV  DW L    A+         +GLR  L ++P  P  YYAAVALDL LR TW+ R+    ADR       +  LEL+EVLRR +W  FR+E E V+       L +D
Sbjct:  162 DILLADVLTSYSRVLADLYVCVCMFLRSGNSAATAPPDRACGASLAVPLLLAL-PYAIRLRQCLTEYLRVRRAPYKESVGWGGQHLANAAKYATAFPVIALN---AAVRPGAPQTSSRPLLGRAWVAAVLLNSLYSFYWDVAKDWDLTLLSARRRAAAPDQPYGLRRRLHLAPGPP-AYYAAVALDLALRCTWVVRVVGPTADRASGLEGSIFALELLEVLRRWVWIFFRVETEHVRNTTTGHGLAVD 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17521.4564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G030_ECTSI1.730e-18074.40EXS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YVP0_9STRA1.810e-5943.79EXS family-domain-containing protein n=1 Tax=Tribo... [more]
W7TLW9_9STRA5.560e-4236.16Protein-er retention protein n=3 Tax=Monodopsidace... [more]
A0A0L0FR54_9EUKA1.270e-3035.24EXS domain-containing protein (Fragment) n=2 Tax=S... [more]
A0A4P9XQW3_9FUNG1.320e-2835.18EXS family-domain-containing protein (Fragment) n=... [more]
F2UM19_SALR51.430e-2832.78EXS domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A7S1IAN5_9EUGL1.880e-2830.87Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1MLS0_ALECA1.290e-2733.10Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A8K1FNJ1_PYTOL1.470e-2731.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
J3NJS2_GAET31.730e-2739.11EXS domain-containing protein n=1 Tax=Gaeumannomyc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 29..316
e-value: 1.6E-61
score: 208.5
IPR004342EXS, C-terminalPROSITEPS51380EXScoord: 139..336
score: 16.301
NoneNo IPR availablePANTHERPTHR10783:SF46PROTEIN ERD1coord: 35..317
NoneNo IPR availablePANTHERPTHR10783XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATEDcoord: 35..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..260
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..141
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17521contigH-elongata_contig17521:2074..5054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17521.4564.1mRNA_H-elongata_contig17521.4564.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17521 1033..5054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17521.4564.1 ID=prot_H-elongata_contig17521.4564.1|Name=mRNA_H-elongata_contig17521.4564.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=337bp
SGPRVAIEDDEPEDTTRKDKPHRVPVPPSWRQVVTTSGVFLGILLACIYG
SRLLLVPPTVAVGGFYFILGVALLVPLQAPSVRDHTSLFFTSLAGVFFPA
TDIHLSEVLVADALTSLSRVFADVAVTFLLVGRGWGVQYPGWCFRLIPCV
FASCPYWVRVRQCATQLATEVDARRRRLLMINVGKYMSAFPVIWLTGYQA
MRQDGGVITSSVLGNCIVAAALFNSIYSFAWDVKMDWGLGQPGAKHWGLR
NTLLISPEDPWPYYAAVALDLLLRLTWLARLADRWLRRTDLVLTLELIEV
LRRSMWNVFRLEWECVQCLGGARPLRLDKGSEALKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C