prot_H-elongata_contig17494.4555.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17494.4555.1
Unique Nameprot_H-elongata_contig17494.4555.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length179
Homology
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A6H5JIN2_9PHAE (Transket_pyr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIN2_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 7.400e-109
Identity = 156/179 (87.15%), Postives = 168/179 (93.85%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRCT GL+E+FGPDRVF++ + EQGI GF IGYASMGKTAI EIQFADYI+PAFDQ+VNEAAKFRYRSG+QFNCGGLTIRAPCGAVGHGGHYHSQSPE+YFAHTPGLKVVMPR+A EAKGLLLA +REPDPVIF EPKILYRTSV DVPD DYEVPLGVAD+MREGTDVTLV
Sbjct:  159 DVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKVVMPRNATEAKGLLLASVREPDPVIFFEPKILYRTSVEDVPDGDYEVPLGVADVMREGTDVTLV 337          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A835ZJS3_9STRA (Thiamine diphosphate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS3_9STRA)

HSP 1 Score: 311 bits (798), Expect = 4.890e-104
Identity = 148/179 (82.68%), Postives = 163/179 (91.06%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRC+VGL+E+FG  RVFNTP++EQGI GF IGYA+MG TAI E+QFADYI+PA DQLVNEAAK+RYRSG++FNCGGLTIRAPCGAVGHGGHYHSQSPE YFAHTPGLKVVMPRDA EAKGLLLA IR+PDPVIFLEPK LYRTSV DVPD DYEVPLGVA ++R G DVT+V
Sbjct:   67 DVAFGGVFRCSVGLKEEFGASRVFNTPLSEQGIAGFAIGYAAMGGTAIAEMQFADYIFPAMDQLVNEAAKYRYRSGNEFNCGGLTIRAPCGAVGHGGHYHSQSPEAYFAHTPGLKVVMPRDAREAKGLLLASIRDPDPVIFLEPKALYRTSVEDVPDGDYEVPLGVAQVLRAGADVTVV 245          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A2R5GAR1_9STRA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAR1_9STRA)

HSP 1 Score: 297 bits (761), Expect = 5.530e-99
Identity = 137/179 (76.54%), Postives = 160/179 (89.39%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRC++GLR++FG +RVFNTP+ EQGI GFGIGYAS G+TAI E+QFADYI+PAFDQLVNEAAK RYRSG+QFNCGGLT+RAP GA+GHGGHYHSQSPE YF HTPGLKVV+PRD ++AKGLLL+CIR+P+P IF EPK LYR SVGDVP  DY +PLG A+I++ GTDVT+V
Sbjct:   27 DVAFGGVFRCSMGLRDEFGKNRVFNTPLCEQGIAGFGIGYASTGRTAIAEVQFADYIFPAFDQLVNEAAKMRYRSGNQFNCGGLTVRAPYGAIGHGGHYHSQSPEAYFTHTPGLKVVIPRDPIQAKGLLLSCIRDPNPCIFFEPKALYRGSVGDVPVGDYTIPLGKAEIVQPGTDVTVV 205          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A7S1XVL4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVL4_9STRA)

HSP 1 Score: 299 bits (765), Expect = 5.990e-99
Identity = 140/179 (78.21%), Postives = 159/179 (88.83%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRC+VGLRE+FGP+RVFNTP+ EQGI GF IGYA+MG+TA+ E+QFADYI+PAFDQ+VNEAAK+RYRSG QFNCG LT RAPCGAVGHGGHYHSQSPE YFA TPGLK+VMPR   EAKGLLLA IR+P+PV+F EPKILYR +V DVP  DYE+PLGVADI+R GT VT+V
Sbjct:   73 DVAFGGVFRCSVGLREEFGPERVFNTPLCEQGIAGFAIGYAAMGRTAVAEMQFADYIFPAFDQIVNEAAKYRYRSGAQFNCGSLTFRAPCGAVGHGGHYHSQSPEAYFAGTPGLKIVMPRSPREAKGLLLASIRDPNPVVFFEPKILYRAAVEDVPVGDYEIPLGVADIVRPGTHVTVV 251          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A7S1C9I4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9I4_9STRA)

HSP 1 Score: 296 bits (758), Expect = 3.220e-98
Identity = 139/179 (77.65%), Postives = 157/179 (87.71%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRC+V LRE+FG DRVFNTP+ EQGI GF IGYA+MG+TAI E+QFADYI+PAFDQ+VNEAAK+RYRSGDQ++CG LTIRAP GAVGHGGHYHSQSPE YFAHTPGLKVV  R   +AKGLLL+CIR+PDP +F EPK LYR SV DVP  DY +PLGVAD+MREGTD+TLV
Sbjct:   50 DVAFGGVFRCSVDLREEFGEDRVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDQYDCGPLTIRAPYGAVGHGGHYHSQSPEAYFAHTPGLKVVFCRSPKDAKGLLLSCIRDPDPCLFFEPKALYRASVEDVPTGDYTIPLGVADVMREGTDITLV 228          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A7R9TFB0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFB0_9VIRI)

HSP 1 Score: 295 bits (754), Expect = 2.230e-97
Identity = 141/179 (78.77%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRCT GL EK+G DRVFNTP+ EQGI GFG+G A+ G TAI EIQFADYI+PAFDQLVNEAAK+RYRSG QF+CGGLT+RAPCGAVGHGGHYHSQSPE YFAHTPGL VVMPR   EAKGLLL+ IR  DPVIFLEPK LYRT+V +VP EDYE+PLG AD++R G DVTLV
Sbjct:   66 DVAFGGVFRCTAGLGEKYGSDRVFNTPLCEQGIAGFGVGLAAQGHTAIAEIQFADYIFPAFDQLVNEAAKYRYRSGGQFDCGGLTVRAPCGAVGHGGHYHSQSPEAYFAHTPGLVVVMPRGPREAKGLLLSSIRSRDPVIFLEPKALYRTAVDEVPAEDYELPLGQADVVRSGGDVTLV 244          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A7S2S755_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S755_9STRA)

HSP 1 Score: 292 bits (748), Expect = 2.260e-96
Identity = 136/179 (75.98%), Postives = 157/179 (87.71%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DV FGGVFRC+  LR +FG DRVFNTP+ EQGI GFGIGYA+MGKTAI EIQFADYI+PAFDQ+VNEAAK+RYRSG+QF+CGGLTIR+P GA+GHGGHYHSQSPE YF HTPGLKVVMPRD ++AKGLLL+CIR+ +P IF EPK LYR SVGDVP  DY +PLG A+I++ GTDVT+V
Sbjct:   73 DVGFGGVFRCSTNLRNEFGRDRVFNTPLCEQGIAGFGIGYAAMGKTAIAEIQFADYIFPAFDQIVNEAAKYRYRSGNQFDCGGLTIRSPYGAIGHGGHYHSQSPEAYFTHTPGLKVVMPRDPIQAKGLLLSCIRDRNPCIFFEPKALYRGSVGDVPVGDYTIPLGKAEIVQPGTDVTVV 251          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A1V9YPY9_9STRA (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY9_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.420e-96
Identity = 138/179 (77.09%), Postives = 158/179 (88.27%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRCTV L+EKFG DRVFN+P+ EQGI GF IGYAS+G+TAI EIQFADYI+PAFDQ+VNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPE YFAHTPGLKVV+PR+  +AKGLLLA IR+P+PV+F EPK LYR SV DVP  D+E+PLGVADI+R GTDVT++
Sbjct:   54 DVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFELPLGVADIVRPGTDVTVL 232          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A067CKD9_SAPPC (2-oxoisovalerate dehydrogenase subunit beta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKD9_SAPPC)

HSP 1 Score: 291 bits (745), Expect = 3.010e-96
Identity = 138/179 (77.09%), Postives = 156/179 (87.15%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRCTV L+EKFG DRVFN+P+ EQGI GF IGYAS+G+TAI EIQFADYI+PAFDQ+VNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPE YFAHTPGLKVV+PR+  +AKGLLLA IR+P+PV+F EPK LYR SV DVP  D+ VPLG ADIMR GTD+T+V
Sbjct:   56 DVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKVVIPRNPTQAKGLLLASIRDPNPVVFFEPKALYRASVSDVPVGDFTVPLGQADIMRSGTDITIV 234          
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Match: A0A7S2UTI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTI8_9STRA)

HSP 1 Score: 291 bits (745), Expect = 3.320e-96
Identity = 135/179 (75.42%), Postives = 158/179 (88.27%), Query Frame = 0
Query:    1 DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVEIQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRTSVGDVPDEDYEVPLGVADIMREGTDVTLV 179
            DVAFGGVFRC++GL+E+FG  RVFNTP++EQG+ GFGIGYA+MG T I EIQFADYI+PAFDQLVNEAAK+RYRSG QF+CGGLT+RAPC AVGHG  YHSQSPE+YFAHTPGLKVV+PR   EAKGLLL  IR+PDPVIF EPKILYRT+V +VP+ D+E+ LG AD++R GTD+TLV
Sbjct:   52 DVAFGGVFRCSIGLKEQFGAHRVFNTPLSEQGVAGFGIGYAAMGGTCIAEIQFADYIFPAFDQLVNEAAKYRYRSGGQFDCGGLTVRAPCAAVGHGALYHSQSPESYFAHTPGLKVVVPRGPAEAKGLLLKSIRDPDPVIFFEPKILYRTAVEEVPEADFEIELGKADVIRPGTDITLV 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17494.4555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIN2_9PHAE7.400e-10987.15Transket_pyr domain-containing protein n=2 Tax=Ect... [more]
A0A835ZJS3_9STRA4.890e-10482.68Thiamine diphosphate-binding protein n=1 Tax=Tribo... [more]
A0A2R5GAR1_9STRA5.530e-9976.54Pyruvate dehydrogenase E1 component subunit beta, ... [more]
A0A7S1XVL4_9STRA5.990e-9978.21Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1C9I4_9STRA3.220e-9877.65Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7R9TFB0_9VIRI2.230e-9778.77Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S2S755_9STRA2.260e-9675.98Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A1V9YPY9_9STRA2.420e-9677.092-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
A0A067CKD9_SAPPC3.010e-9677.092-oxoisovalerate dehydrogenase subunit beta n=2 Ta... [more]
A0A7S2UTI8_9STRA3.320e-9675.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 1..150
e-value: 3.1E-45
score: 166.3
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 1..149
e-value: 7.4E-41
score: 139.8
NoneNo IPR availableGENE3D3.40.50.970coord: 1..167
e-value: 2.3E-80
score: 270.3
NoneNo IPR availablePANTHERPTHR42980FAMILY NOT NAMEDcoord: 1..179
NoneNo IPR availablePANTHERPTHR42980:SF12-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIALcoord: 1..179
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 4..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17494contigH-elongata_contig17494:1979..3822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17494.4555.1mRNA_H-elongata_contig17494.4555.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17494 1979..3822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17494.4555.1 ID=prot_H-elongata_contig17494.4555.1|Name=mRNA_H-elongata_contig17494.4555.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
DVAFGGVFRCTVGLREKFGPDRVFNTPITEQGIVGFGIGYASMGKTAIVE
IQFADYIYPAFDQLVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYH
SQSPETYFAHTPGLKVVMPRDAVEAKGLLLACIREPDPVIFLEPKILYRT
SVGDVPDEDYEVPLGVADIMREGTDVTLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR029061THDP-binding