prot_H-elongata_contig174233.4529.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174233.4529.1
Unique Nameprot_H-elongata_contig174233.4529.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig174233.4529.1 vs. uniprot
Match: A0A6H5K8A3_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8A3_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.850e-22
Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 LQAYVDKVAVTEPGVKRVCLISKAGLLGMYASCGFSMKGLSQVALGKDPWFEMSID 56
            L+AYV+ VA+T+PGV+RVCLI+KAGLLGMYASCGF++KGLS V  GKDPWFEM ID
Sbjct:   75 LKAYVENVALTQPGVRRVCLIAKAGLLGMYASCGFTLKGLSPVVHGKDPWFEMRID 130          
BLAST of mRNA_H-elongata_contig174233.4529.1 vs. uniprot
Match: A0A0G4ELI9_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELI9_VITBC)

HSP 1 Score: 64.3 bits (155), Expect = 1.240e-10
Identity = 28/53 (52.83%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    4 YVDKVAVTEPGVKRVCLISKAGLLGMYASCGFSMKGLSQVALGKDPWFEMSID 56
            Y+  +++ +P ++ V LISKA LL  Y SCGF+++GLS V LGKD WF+MS+D
Sbjct:  356 YIKLMSLYDPSLQHVLLISKAPLLRFYRSCGFTVEGLSSVELGKDSWFQMSMD 408          
BLAST of mRNA_H-elongata_contig174233.4529.1 vs. uniprot
Match: A0A167GKL5_CALVF (Acyl-CoA N-acyltransferase n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167GKL5_CALVF)

HSP 1 Score: 48.5 bits (114), Expect = 4.420e-5
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    1 LQAYVDKVAVTEPG-VKRVCLISKAGLLGMYASCGFSMKGLSQVALGKDPWFEMSID 56
            L+ Y  +    + G VKR+ L+S+A L G+YA  GFS  G S V  GK+ W++M +D
Sbjct:  118 LEEYAKRARQGQMGDVKRIALLSRADLRGLYAQAGFSELGESAVQHGKEKWYDMVLD 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174233.4529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8A3_9PHAE4.850e-2276.79N-acetyltransferase domain-containing protein n=2 ... [more]
A0A0G4ELI9_VITBC1.240e-1052.83Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A167GKL5_CALVF4.420e-542.11Acyl-CoA N-acyltransferase n=1 Tax=Calocera viscos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.630.30coord: 1..56
e-value: 4.0E-13
score: 51.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174233contigH-elongata_contig174233:815..982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174233.4529.1mRNA_H-elongata_contig174233.4529.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174233 815..982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174233.4529.1 ID=prot_H-elongata_contig174233.4529.1|Name=mRNA_H-elongata_contig174233.4529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
LQAYVDKVAVTEPGVKRVCLISKAGLLGMYASCGFSMKGLSQVALGKDPW
FEMSID
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