prot_H-elongata_contig17418.4527.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig17418.4527.1
Unique Name	prot_H-elongata_contig17418.4527.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	324

Homology

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BLAST of mRNA_H-elongata_contig17418.4527.1 vs. uniprot
Match: D7G7F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F4_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 1.800e-113
Identity = 190/324 (58.64%), Postives = 230/324 (70.99%), Query Frame = 0

Query:    2 DANETKSKLLGGYLRARLLENIDSPEPAKELMKRSFRHLHRGQGHILTLDEFKEGLANTFGLLIPRQLVHATFEMFDTEPRTWQLDFDEFCHWLETGKRSLNRHGV-SADFDPNKGSPSKPEEIQGRKPRSHYTAGAFQLGAKTVDDKGMSFYQNDRATLKAHLLKYKDRLRKTTGLTEAQKSVLDQLLLEKIKPKRETSFSGTETFNGLEKFNAFARGSDCVTWDGFKKEVTTLLPHLTEESEVREAFSRMDYNGDGVVDLTDFLMWEERMQEGRGKTDFW---QEQHLETIKLAKHRASNILVPEDHDGSTFFARLIREKAK 321
            D NETKSKLLGGYLR  LL NI   EPAKEL+KRSFRHLHRGQGH+LT DEFKEGL+NTFG LIP QL+ ATF++FDTEPRTWQLDFDEFCHWL+TG+R LN HGV       N   P++    + RKPRS+ T+G F    K  +   MS  Q DRA LKAHL+K++ ++ K  GLTEAQKS++D +L++KIK +                                 K+VT +LPHL EESE+R+AFSRMD+NGDGVVDLTDFLMWEERMQEGRG TDF+   +E HLE IKLA+ +ASN+LVP+D+DGST+ A+L RE A+
Sbjct:  133 DTNETKSKLLGGYLRDHLLANITCNEPAKELVKRSFRHLHRGQGHVLTFDEFKEGLSNTFGALIPLQLIQATFDIFDTEPRTWQLDFDEFCHWLDTGERVLNSHGVMKKPVKTNSAPPAEGAPPKARKPRSNDTSGEFNSSIKDCNGVSMSMEQADRAQLKAHLMKHRKKIHKPGGLTEAQKSIVDHILMDKIKAR---------------------------------KKVTGMLPHLHEESEIRDAFSRMDHNGDGVVDLTDFLMWEERMQEGRGNTDFFALQEEDHLEQIKLARSKASNLLVPDDYDGSTYHAKLSREIAQ 423

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BLAST of mRNA_H-elongata_contig17418.4527.1 vs. uniprot
Match: A0A6H5JR82_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR82_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.100e-59
Identity = 105/166 (63.25%), Postives = 120/166 (72.29%), Query Frame = 0

Query:    2 DANETKSKLLGGYLRARLLENIDSPEPAKELMKRSFRHLHRGQGHILTLDEFKEGLANTFGLLIPRQLVHATFEMFDTEPRTWQLDFDEFCHWLETGKRSLNRHGV------SADFDPNKGSPSKPEEIQGRKPRSHYTAGAFQLGAKTVDDKGMSFYQNDRATLK 161
            D NET SKLLGGYLR  LL+NI   EPAKEL+KRSFRHLHRGQGH+LT DEFKEGL+NTFG LIP QL+ ATF++FDTEPRTWQLDFDEFCHWL+TG+R LN HGV      +    P +G+P K      RKPRS+ T+G F    K  +   MS  Q DRA LK
Sbjct:  147 DINETMSKLLGGYLREHLLDNITCNEPAKELVKRSFRHLHRGQGHLLTFDEFKEGLSNTFGALIPLQLIQATFDIFDTEPRTWQLDFDEFCHWLDTGERVLNSHGVMKKPVKTDSAPPAEGAPPK-----ARKPRSNDTSGEFNSSIKDCNGVSMSMEQADRAQLK 307

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BLAST of mRNA_H-elongata_contig17418.4527.1 vs. uniprot
Match: A0A836C9J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J2_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.920e-54
Identity = 117/287 (40.77%), Postives = 160/287 (55.75%), Query Frame = 0

Query:   45 GHILTLDEFKEGLANTFGLLIPRQLVHATFEMFDTEPRTWQLDFDEFCHWLETGKRSLNRHGVSADFDPNKGSPSKPEEIQGRKPRSHYTAGAFQLGAKTVDDKGMSFYQNDRATLKAHLLKYKDRLRKTTGLTEAQKSVLDQLLLEKIKPKRETSFSGTETFNGLEKFNAFARG--SDCVTWDGFKKEVTTLLPHLTEESEVREAFSRMDYNGDGVVDLTDFLMWEERMQEGRG------KTDFW---QEQHLETIKLAKHRASNILVPEDHDGSTFFARLIREKA 320
            GH+LT +EFK+GL   FG  +   +V ATF++FDT PRTWQLDFDEFC WL+TGKR                                      Q G +   D+ +S  Q +R  LKAHLLK+KDRL     LT+AQK ++D +LLE+IK   +        F+ L  F   +RG  S  + W+ F+ E+ TL+ HLT+  EV   F RMD NGDG VDL+DF++W E++  GR         D+W   +E+HL  +K  +   +N LVP+D+DGST+ ARL R+K+
Sbjct:  212 GHVLTFEEFKDGLGQAFGGQLHPDIVRATFDLFDTVPRTWQLDFDEFCAWLDTGKRGAQXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXQQHGRR---DRRLSAEQLEREQLKAHLLKHKDRLH-APCLTDAQKGLIDIMLLERIKKHAKAGGGEGSNFDTLSAFRKLSRGAPSGKLQWEAFRAEMATLMKHLTDGDEVLGVFKRMDNNGDGAVDLSDFMVWVEKVSSGRSIASGQNPQDYWALEEEEHLRQLKDKRLMCTNPLVPDDYDGSTWIARLNRQKS 490

[Close]

BLAST of mRNA_H-elongata_contig17418.4527.1 vs. uniprot
Match: A0A6H5JXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC8_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 7.640e-33
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 0

Query:  219 GSDCVTWDGFKKEV-----------------------------TTLLPHLTEESEVREAFSRMDYNGDGVVDLTDFLMWEERMQEGRGKTDFW---QEQHLETIKLAKHRASNILVPEDHDGSTFFARLIREKAK 321
            G+D + W  FKKEV                             T +LPHL EESE+R+AFSRMD+NGDGVVDLTDFLMWEERMQEGRG TDF+   +E HLE IKLA+ +A N+LVP+D+DGST+ A+L RE A+
Sbjct:    7 GNDSMAWPAFKKEVGSFERNGIEPLRTHELLPTRFRIQHPPKVTGMLPHLHEESEIRDAFSRMDHNGDGVVDLTDFLMWEERMQEGRGNTDFFALQEEDHLEQIKLARSKAFNLLVPDDYDGSTYHAKLSREIAQ 141

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig17418.4527.1 vs. uniprot

BLAST of mRNA_H-elongata_contig17418.4527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G7F4_ECTSI	1.800e-113	58.64	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JR82_9PHAE	1.100e-59	63.25	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A836C9J2_9STRA	1.920e-54	40.77	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JXC8_9PHAE	7.640e-33	54.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 253..265
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 240..275 score: 10.162
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 65..101 score: 5.475
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 30..269

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig17418	contig	H-elongata_contig17418:3920..7369 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig17418.4527.1	mRNA_H-elongata_contig17418.4527.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig17418 3920..7369 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig17418.4527.1 ID=prot_H-elongata_contig17418.4527.1|Name=mRNA_H-elongata_contig17418.4527.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
RDANETKSKLLGGYLRARLLENIDSPEPAKELMKRSFRHLHRGQGHILTL
DEFKEGLANTFGLLIPRQLVHATFEMFDTEPRTWQLDFDEFCHWLETGKR
SLNRHGVSADFDPNKGSPSKPEEIQGRKPRSHYTAGAFQLGAKTVDDKGM
SFYQNDRATLKAHLLKYKDRLRKTTGLTEAQKSVLDQLLLEKIKPKRETS
FSGTETFNGLEKFNAFARGSDCVTWDGFKKEVTTLLPHLTEESEVREAFS
RMDYNGDGVVDLTDFLMWEERMQEGRGKTDFWQEQHLETIKLAKHRASNI
LVPEDHDGSTFFARLIREKAKVQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair