prot_H-elongata_contig1735.4501.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1735.4501.1
Unique Nameprot_H-elongata_contig1735.4501.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length590
Homology
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: A0A6H5JT33_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT33_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.380e-31
Identity = 217/635 (34.17%), Postives = 269/635 (42.36%), Query Frame = 0
Query:    1 MKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVEGAGRPTGSLSSRASADPSRGVRCESGAAMRGWGIEDVDGLGGVGVGLGRLSVD---GCGENH-DEEDSKL-FPPAAPAGA--------------GCCDAAA---FLPLHVMSRKRKIM----VENVGIGDGPKNVCDNGSVASPWTSGAAASGVVVKQEMIVDPRQRATERPTVKPEMMDEEPVSETPA-SWPPYAEPPVPSSLTTPDAADAAFSTSDSLRAASSFARGNSG---DFLEGFTEQFLSFELPSSSYVFPDRAAGGKSTDRCGSGKGPVASVGRGYAMTDIDVDVGIDGSDCRSQSEGEEHIDIEGEVGMLATAMSLGLEGRATAPALAHGVVGGISGTGAGGDGVSTAMRATPSPIQDPSMNETCEKGATW------------TLPLGLEELQHSLESLPLHSKTKVWVEIGGIE-ASDRSLWICFPSPCLPNNAFNESALKEGLSALMQHPTFLAALIAHGQGKGAPVASSASNEETP--GVRPTDVADGAISPDRAISNNEGNTSRARSPTQNAEEGCESVSANSGXXXXXXXXXXXXXXXXXXXXXXGCCPS-RSQNRGEFGGRLPRSEEACA 589
            M+RATHYG   D +EVE LRSEV RLR+HI +MGDKIGQLTSLVE+L+VEG     G  +    A     V    G      G E    L GV  GLGRLS       G+   D ED +   PPA PAGA              G  D  A   FLPL   SRKRK++    V   G G G                    S  V+KQEM V  ++   +    + E+     +    + S PP AE P                   S    S F  G+S    +FL GF +QFLS E P++SY+ PDR   G       S    VA      AMT     V   G+ CR+ S                      L GR +     +       GT  G        R     +++    ETCE G T             +L L     Q ++    L  +     ++  +E A  +S     PSP  P        LKEGLS LMQ+P  LAAL    + + +  + S SN  +P     PT  A G   P  A S+     +           G  + +A+  XXXXXXXXXXXXXXXXXXXXXX  C S RS+ RGEFG R PRSEEACA
Sbjct:  124 MRRATHYGVAADKQEVEQLRSEVTRLRSHIHDMGDKIGQLTSLVESLSVEGHAGSGGDTTVEGPAGQ-LAVSHRRGPTPPPGGDE----LCGVRAGLGRLSFGFDAAAGDQEGDGEDLRFSLPPAVPAGACGVPDRSDLEDVEVGLADDPALGSFLPLRARSRKRKLVRFDGVLANGSGSGXXXXXXXXXXXXXXXXXXXHSPAVIKQEMAVK-QEMVVDPMDAESELAGGGDLGAFASNSTPPLAETP-------------------SAELVSGFGGGSSSSSNEFLHGFADQFLSTESPTASYMLPDRGGAGDGDFTAASTSDDVAFSAA--AMTGNWTSVVQGGAGCRACS--------------CVAPDGGSLNGRGSGGGTDNXXXXXXXGTRDG--------RQARHAMEEDFNVETCETGQTDESSIPSIPSPPPSLSLNTRSGQSAVVQRALQQQQTQQQQLHAVEDARGKSSGAAGPSPFPPPPLRTGEELKEGLSTLMQNPALLAALT---EKQRSSYSESGSNRSSPTNNSAPTAAAAG---PQMAESDARATVAEKGQARPRTRSGAVAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGRSRGRGEFGQRFPRSEEACA 703          
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Match: D8LTY4_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY4_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.520e-19
Identity = 89/230 (38.70%), Postives = 110/230 (47.83%), Query Frame = 0
Query:    1 MKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVEGAGRPTGSLSSRASADPSRGVRCESGAAMRGWGIEDVDG---LGGVGVGLGRLSV--DGCGENHDEEDSKL---FPPAAPAGA----------------GCCDAA--AFLPLHVMSRKRKIMVENVGIGDGPKNVCDNGSVASPW----------TSGAAASGVVVKQEMIVDPRQRATE 194
            M+RATHYG   D +EVE LRSEV RLR+HID MGDKIGQLTSLVE+L+VEG    TGS     +A P+  +     AA    G     G   L GV  GLGRLS   D    + +E+   L    PPA PAGA                G  D A  +FLPL   SRKRK++  +  + +G                        +       + VKQEM+VDP    +E
Sbjct:  124 MRRATHYGVAADKQEVEHLRSEVTRLRSHIDAMGDKIGQLTSLVESLSVEG---HTGSGGDTTAAGPAGQL-----AASHRHGPTPPPGGDELCGVRAGLGRLSFGFDAAAGDQEEDGEDLRFSLPPAVPAGACGVPDRSDLEDVEVGLGEADPALGSFLPLRARSRKRKLVRFDGVLANGXXXXXXXXXXXXXXXXXXXXXXXHSPAVIKQEMTVKQEMLVDPMDAESE 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1735.4501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT33_9PHAE1.380e-3134.17HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D8LTY4_ECTSI2.520e-1938.70Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1735contigH-elongata_contig1735:11316..13417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1735.4501.1mRNA_H-elongata_contig1735.4501.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1735 10107..14092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1735.4501.1 ID=prot_H-elongata_contig1735.4501.1|Name=mRNA_H-elongata_contig1735.4501.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=590bp
MKRATHYGAPVDSKEVEDLRSEVNRLRNHIDNMGDKIGQLTSLVEALAVE
GAGRPTGSLSSRASADPSRGVRCESGAAMRGWGIEDVDGLGGVGVGLGRL
SVDGCGENHDEEDSKLFPPAAPAGAGCCDAAAFLPLHVMSRKRKIMVENV
GIGDGPKNVCDNGSVASPWTSGAAASGVVVKQEMIVDPRQRATERPTVKP
EMMDEEPVSETPASWPPYAEPPVPSSLTTPDAADAAFSTSDSLRAASSFA
RGNSGDFLEGFTEQFLSFELPSSSYVFPDRAAGGKSTDRCGSGKGPVASV
GRGYAMTDIDVDVGIDGSDCRSQSEGEEHIDIEGEVGMLATAMSLGLEGR
ATAPALAHGVVGGISGTGAGGDGVSTAMRATPSPIQDPSMNETCEKGATW
TLPLGLEELQHSLESLPLHSKTKVWVEIGGIEASDRSLWICFPSPCLPNN
AFNESALKEGLSALMQHPTFLAALIAHGQGKGAPVASSASNEETPGVRPT
DVADGAISPDRAISNNEGNTSRARSPTQNAEEGCESVSANSGSGKTSSSS
SSSNGAGSGGTGSGGCCPSRSQNRGEFGGRLPRSEEACA*
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