prot_H-elongata_contig17334.4496.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17334.4496.1
Unique Nameprot_H-elongata_contig17334.4496.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.620e-36
Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEEGDILALGCWDQTLSFYLSSGEKFQQRR 86
            +VHAKILS  WS DGLHLALGF DG+VGIRD +G+EKVTI+R  APVWCLAWCPA E+G++LALGCWDQTLSFYL SGE+  + R
Sbjct:  138 KVHAKILSAGWSPDGLHLALGFFDGNVGIRDVNGVEKVTITR-GAPVWCLAWCPAQEDGEVLALGCWDQTLSFYLLSGEQHTKDR 221          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A0J8B030_BETVV (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B030_BETVV)

HSP 1 Score: 96.3 bits (238), Expect = 8.880e-24
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    1 WQVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEEGD-ILALGCWDQTLSFYLSSGEKFQQRR 86
            ++V +KI+S  W+ DG +LALG  DGHV IRD  G EK  I R + P+WCL W P+  EG   LA+GCWDQTLSFY  +G++  + R
Sbjct:   24 YKVSSKIVSASWTPDGNYLALGQYDGHVSIRDRQGNEKSVIERHE-PIWCLQWSPSNSEGQSTLAVGCWDQTLSFYQINGQQLWKDR 109          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A7S3VV23_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3VV23_9SPIT)

HSP 1 Score: 95.1 bits (235), Expect = 1.420e-23
Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPA---TEEGDILALGCWDQTLSFYLSSGEKF 82
            +V AKIL++ W++DGLHLA+G   GH+ IRD  G+EK  + R  AP+W L W P    T+  D+L +GCWDQTLSFY  SG ++
Sbjct:    8 KVSAKILAMSWTNDGLHLAIGLFSGHISIRDKFGMEKADVIR-SAPIWTLTWNPVPTKTDPTDVLIVGCWDQTLSFYKVSGVEY 90          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A835ZL39_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL39_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.460e-23
Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPA------------TEEGDILALGCWDQTLSFYLSSGE 80
            +VHAKI S  WS+DG HLALGFIDG + +RD +G+EKVTISR   P+W L W P              ++ ++LA+GCWDQTLSFY  SGE
Sbjct:  138 KVHAKITSASWSNDGQHLALGFIDGKIIVRDKEGVEKVTISR-GGPIWSLNWSPLPTDSYSVAASYNNDDPELLAVGCWDQTLSFYDMSGE 227          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A6U4JUW1_9STRA (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JUW1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.480e-23
Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEEGDILALGCWDQTLSFYLSSG 79
            +V +KILS DW+  GLH ALG  +G V IRD DG E++TI R  APVW LAW PA ++ +ILA+GCW+QTLSFY  +G
Sbjct:  137 RVESKILSADWTPSGLHFALGLFNGKVQIRDKDGAERLTIER-SAPVWTLAWSPARDDREILAVGCWNQTLSFYKLNG 213          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A8J2WGR4_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGR4_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.300e-23
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEE-GDILALGCWDQTLSFYLSSGEKFQQRR 86
            +V AKILS  WS DG +LALG  DG + IRD  G E   I ++ APVWCLAW PA E+ GD+LA+GCWDQTLSFY  SG +  + R
Sbjct:  139 KVGAKILSARWSHDGQYLALGMYDGRISIRDKGGQEYKLIEKK-APVWCLAWSPAKEDPGDLLAVGCWDQTLSFYQLSGTQHLKER 223          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A662WK66_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WK66_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 7.420e-22
Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEE--GDILALGCWDQTLSFYLSSG 79
            +V AKIL+  WS DG  LALG ++G V +RD  G EK  I R +APVW LAW PATEE   D+LA+GCWD+TL+FY  SG
Sbjct: 1307 KVVAKILAACWSKDGQLLALGLLNGTVTLRDKQGAEKRLIERSNAPVWALAWSPATEEDASDVLAVGCWDRTLAFYTQSG 1386          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A662X2J5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2J5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 7.430e-22
Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEE--GDILALGCWDQTLSFYLSSG 79
            +V AKIL+  WS DG  LALG ++G V +RD  G EK  I R +APVW LAW PATEE   D+LA+GCWD+TL+FY  SG
Sbjct: 1356 KVVAKILAACWSKDGQLLALGLLNGTVTLRDKQGAEKRLIERSNAPVWALAWSPATEEDASDVLAVGCWDRTLAFYTQSG 1435          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A2P4XSI5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSI5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 8.870e-22
Identity = 48/80 (60.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEEG--DILALGCWDQTLSFYLSSG 79
            +V AKILS  WS DG  LALG ++G+V +RD  G EK  I R +APVW LAW PA E+   DILA+GCWD+TLSFY  SG
Sbjct:  136 KVVAKILSACWSKDGQLLALGLLNGNVTLRDKLGAEKRLIERSNAPVWALAWSPAHEDDSTDILAVGCWDRTLSFYSPSG 215          
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Match: A0A397EQ07_9STRA (Intraflagellar transport protein 122 homolog n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EQ07_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.440e-21
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    2 QVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWCLAWCPATEEG-DILALGCWDQTLSFYLSSGEKFQQRR 86
            +V +KILS  WS DG +LALG  +GH+ IRD  G EK+TI R  APVW L+W P  EE  DILA+GCWD+TLSFY  +G ++ + R
Sbjct:  136 KVVSKILSASWSLDGEYLALGMFNGHILIRDKHGGEKITIERT-APVWSLSWSPGREEQMDILAVGCWDRTLSFYQFNGTQYGKDR 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17334.4496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW9_ECTSI2.620e-3674.12Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A0J8B030_BETVV8.880e-2451.72Intraflagellar transport protein 122 homolog (Frag... [more]
A0A7S3VV23_9SPIT1.420e-2351.19Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A835ZL39_9STRA4.460e-2353.85Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A6U4JUW1_9STRA5.480e-2358.97Intraflagellar transport protein 122 homolog (Frag... [more]
A0A8J2WGR4_9STRA8.300e-2358.14Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A662WK66_9STRA7.420e-2258.75Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A662X2J5_9STRA7.430e-2258.75Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A2P4XSI5_9STRA8.870e-2260.00Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A397EQ07_9STRA3.440e-2155.81Intraflagellar transport protein 122 homolog n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..85
e-value: 2.0E-12
score: 49.2
IPR039857Intraflagellar transport protein 122 homologPANTHERPTHR12764WD REPEAT DOMAIN-RELATEDcoord: 2..86
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17334contigH-elongata_contig17334:5091..5519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17334.4496.1mRNA_H-elongata_contig17334.4496.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17334 5091..5519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17334.4496.1 ID=prot_H-elongata_contig17334.4496.1|Name=mRNA_H-elongata_contig17334.4496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
WQVHAKILSVDWSSDGLHLALGFIDGHVGIRDADGIEKVTISRRDAPVWC
LAWCPATEEGDILALGCWDQTLSFYLSSGEKFQQRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR039857Ift122
IPR036322WD40_repeat_dom_sf