prot_H-elongata_contig173024.4484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig173024.4484.1
Unique Nameprot_H-elongata_contig173024.4484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig173024.4484.1 vs. uniprot
Match: D7FQE4_ECTSI (Heat shock protein, mitochondrial protein import, putative mitochondrial translocase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE4_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.460e-19
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 0 
Query:    1 MDVPYFGNNIEEYMQSIGSPDEVTKGTAPGLTPEVLEKFDVSVGADGVLNLNPK 54
            +D P FGNNIEEYMQS G+PDEVTKG AP LTPE+ EKFDV++G DGVL L+PK
Sbjct:  596 LDFPAFGNNIEEYMQSTGTPDEVTKGRAPDLTPEIAEKFDVAMGKDGVLTLSPK 649
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173024.4484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQE4_ECTSI3.460e-1974.07Heat shock protein, mitochondrial protein import, ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173024contigH-elongata_contig173024:948..1112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173024.4484.1mRNA_H-elongata_contig173024.4484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig173024 939..1112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig173024.4484.1 ID=prot_H-elongata_contig173024.4484.1|Name=mRNA_H-elongata_contig173024.4484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MDVPYFGNNIEEYMQSIGSPDEVTKGTAPGLTPEVLEKFDVSVGADGVLN
LNPK*
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