prot_H-elongata_contig17295.4480.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17295.4480.1
Unique Nameprot_H-elongata_contig17295.4480.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig17295.4480.1 vs. uniprot
Match: D7G6P8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P8_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 7.670e-31
Identity = 58/86 (67.44%), Postives = 64/86 (74.42%), Query Frame = 0 
Query:    1 MLKALGIDGSVMCMTTDTAANMKKGATVDM-PGVRWLGCSCHKVELTVQKFVNHRSLKQTLSIFTKVAGHLHKSALLQQGFENAQR 85
            MLKALGI+  V+ MTTDTAANMK G  V M P ++WLGC CHK ELTVQKFVN   LK+TL  FTKVAGHLHKSAL    F  AQ+
Sbjct:    1 MLKALGIENQVISMTTDTAANMKNGVIVHMAPQIQWLGCGCHKTELTVQKFVNTPGLKETLKRFTKVAGHLHKSALSLGAFFEAQK 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17295.4480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6P8_ECTSI7.670e-3167.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17295contigH-elongata_contig17295:1253..1507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17295.4480.1mRNA_H-elongata_contig17295.4480.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17295 1253..1507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17295.4480.1 ID=prot_H-elongata_contig17295.4480.1|Name=mRNA_H-elongata_contig17295.4480.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MLKALGIDGSVMCMTTDTAANMKKGATVDMPGVRWLGCSCHKVELTVQKF
VNHRSLKQTLSIFTKVAGHLHKSALLQQGFENAQR
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