prot_H-elongata_contig172885.4476.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172885.4476.1
Unique Nameprot_H-elongata_contig172885.4476.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A7S6ZPB8_9STRA (50S ribosomal protein L31, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPB8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.240e-20
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 37
            IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK
Sbjct:   35 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 71          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A3G2QZX3_9STRA (50S ribosomal protein L31, chloroplastic n=1 Tax=Neotessella volvocina TaxID=2419522 RepID=A0A3G2QZX3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.090e-17
Identity = 31/37 (83.78%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 37
            +DIWSGNHPFYTGSQRIIDTEGRV++F RKYN+NE+K
Sbjct:   34 VDIWSGNHPFYTGSQRIIDTEGRVEKFQRKYNINETK 70          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A1G4NXX0_9FLOR (50S ribosomal protein L31, chloroplastic n=1 Tax=Scinaia undulata TaxID=1884664 RepID=A0A1G4NXX0_9FLOR)

HSP 1 Score: 74.7 bits (182), Expect = 8.500e-17
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 37
            +DIWSGNHPF+TGSQRIIDTEGRV+RF RKYNL E K
Sbjct:   35 VDIWSGNHPFFTGSQRIIDTEGRVERFVRKYNLTEQK 71          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A342RZF5_9FLOR (50S ribosomal protein L31, chloroplastic n=1 Tax=Mastocarpus papillatus TaxID=31436 RepID=A0A342RZF5_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 1.670e-16
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 37
            +DIWSGNHPF+TGSQRIIDTEGRV+RF RKYNL + K
Sbjct:   35 VDIWSGNHPFFTGSQRIIDTEGRVERFMRKYNLKDEK 71          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A4D6WRK3_9FLOR (50S ribosomal protein L31, chloroplastic n=1 Tax=Dicranema revolutum TaxID=239144 RepID=A0A4D6WRK3_9FLOR)

HSP 1 Score: 73.6 bits (179), Expect = 2.260e-16
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNES 36
            +DIWSGNHPF+TGSQRIIDTEGRV+RF RKYNL E+
Sbjct:   35 VDIWSGNHPFFTGSQRIIDTEGRVERFMRKYNLQET 70          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: UPI001FCE16DD (ribosomal protein L31 n=1 Tax=Rhodella violacea TaxID=2801 RepID=UPI001FCE16DD)

HSP 1 Score: 73.2 bits (178), Expect = 3.460e-16
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 37
            ID+WSGNHPFYTGSQRIIDTEGRV+RF RKYN  +S+
Sbjct:   35 IDLWSGNHPFYTGSQRIIDTEGRVERFMRKYNFTKSE 71          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A1Z1XB65_9RHOD (50S ribosomal protein L31 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A1Z1XB65_9RHOD)

HSP 1 Score: 72.4 bits (176), Expect = 3.800e-16
Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNE 35
            +DIWSGNHPF+TGSQ+IIDTEGRV+RF RKYN+N+
Sbjct:   12 VDIWSGNHPFFTGSQKIIDTEGRVERFMRKYNIND 46          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A3G2QYG5_9STRA (50S ribosomal protein L31, chloroplastic n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A3G2QYG5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.840e-16
Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK 37
            +DIWSGNHPFYTGSQ+IIDTEGRV++F RKYNL ES+
Sbjct:   34 VDIWSGNHPFYTGSQKIIDTEGRVEKFERKYNLKESE 70          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A4D6X3G0_9FLOR (50S ribosomal protein L31, chloroplastic n=1 Tax=Inkyuleea mariana TaxID=123988 RepID=A0A4D6X3G0_9FLOR)

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-16
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLN 34
            IDIWSGNHPF+TGSQ+IIDTEGRV+RF RKYNLN
Sbjct:   35 IDIWSGNHPFFTGSQKIIDTEGRVERFMRKYNLN 68          
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Match: A0A1C9C7T8_RHOPU (50S ribosomal protein L31, chloroplastic n=1 Tax=Rhodymenia pseudopalmata TaxID=31502 RepID=A0A1C9C7T8_RHOPU)

HSP 1 Score: 72.8 bits (177), Expect = 4.920e-16
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNE 35
            IDIWSGNHPF+TGSQRIIDTEGRV+RF RKYN+ E
Sbjct:   35 IDIWSGNHPFFTGSQRIIDTEGRVERFMRKYNIKE 69          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172885.4476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPB8_9STRA1.240e-20100.0050S ribosomal protein L31, chloroplastic n=1 Tax=S... [more]
A0A3G2QZX3_9STRA2.090e-1783.7850S ribosomal protein L31, chloroplastic n=1 Tax=N... [more]
A0A1G4NXX0_9FLOR8.500e-1783.7850S ribosomal protein L31, chloroplastic n=1 Tax=S... [more]
A0A342RZF5_9FLOR1.670e-1681.0850S ribosomal protein L31, chloroplastic n=1 Tax=M... [more]
A0A4D6WRK3_9FLOR2.260e-1683.3350S ribosomal protein L31, chloroplastic n=1 Tax=D... [more]
UPI001FCE16DD3.460e-1681.08ribosomal protein L31 n=1 Tax=Rhodella violacea Ta... [more]
A0A1Z1XB65_9RHOD3.800e-1680.0050S ribosomal protein L31 n=1 Tax=Compsopogon caer... [more]
A0A3G2QYG5_9STRA3.840e-1681.0850S ribosomal protein L31, chloroplastic n=1 Tax=S... [more]
A0A4D6X3G0_9FLOR4.800e-1688.2450S ribosomal protein L31, chloroplastic n=1 Tax=I... [more]
A0A1C9C7T8_RHOPU4.920e-1685.7150S ribosomal protein L31, chloroplastic n=1 Tax=R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002150Ribosomal protein L31TIGRFAMTIGR00105TIGR00105coord: 1..33
e-value: 1.1E-14
score: 52.2
IPR002150Ribosomal protein L31PFAMPF01197Ribosomal_L31coord: 1..32
e-value: 1.6E-13
score: 50.7
IPR002150Ribosomal protein L31PANTHERPTHR33280FAMILY NOT NAMEDcoord: 1..35
IPR002150Ribosomal protein L31PROSITEPS01143RIBOSOMAL_L31coord: 2..23
IPR042105Ribosomal protein L31 superfamilyGENE3D2.30.170.50coord: 1..37
e-value: 4.8E-14
score: 54.0
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172885contigH-elongata_contig172885:1228..1341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172885.4476.1mRNA_H-elongata_contig172885.4476.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172885 1228..1341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172885.4476.1 ID=prot_H-elongata_contig172885.4476.1|Name=mRNA_H-elongata_contig172885.4476.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
IDIWSGNHPFYTGSQRIIDTEGRVQRFFRKYNLNESK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002150Ribosomal_L31
IPR042105Ribosomal_L31_sf
IPR034704L28p-like