prot_H-elongata_contig172820.4473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172820.4473.1
Unique Nameprot_H-elongata_contig172820.4473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: D7FPE8_ECTSI (Intraflagellar transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 9.260e-53
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0
Query:    1 MSGMKASGHGMG------RQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            MSGMK +G          RQVQDGS+FIGVLR K+ND RAE+ RLQ EI++HE+   QQGHLERT++TMLQDVK LEG LADYN+AVDKARTT DPGE+T++LHDLED NR+E   +DEIFLAKQ+ ERE QE+E EMEAVH
Sbjct:   71 MSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQDVKALEGTLADYNLAVDKARTTADPGEVTKYLHDLEDRNRREAQGLDEIFLAKQQHERETQELEAEMEAVH 212          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A6H5JUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN2_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.160e-44
Identity = 95/175 (54.29%), Postives = 112/175 (64.00%), Query Frame = 0
Query:    1 MSGMKASGHGMG----RQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQ-----------------------------------DVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            MSGMK +         RQVQDGS+FIGVLR K+ND RAE+ RLQ EI++HE+   QQGHLERT++TMLQ                                   DVK LEG LADYN+AVDKARTT DP E+T++LHDLED NR+E   +DEIFLAKQ+ ERE QE+E EMEAVH
Sbjct:    1 MSGMKTAAXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKALEGTLADYNLAVDKARTTADPSEITKYLHDLEDRNRREAQGLDEIFLAKQQHERETQELEAEMEAVH 175          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A836CE00_9STRA (Intraflagellar transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA)

HSP 1 Score: 132 bits (331), Expect = 7.630e-34
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = 0
Query:    1 MSGMKAS-GHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            MSGM+ S G G GR VQDGS+F+G LR KI D + E+ +L+ E EQH +D+ Q G LERT+ET+L +VK LEG LAD+N+A+DKARTT DPGE+  +L +LED NR+   ++D +FL+KQ  ER   ++E+ +  VH
Sbjct:   61 MSGMRTSQGAGPGRLVQDGSFFLGQLRQKIMDIQRELAKLKAEGEQHTKDSSQYGGLERTYETLLAEVKNLEGTLADHNLAMDKARTTADPGEVVAYLSELEDRNRRNARELDNVFLSKQERERAVADVEQAIAQVH 197          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A6V2XWW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK)

HSP 1 Score: 125 bits (313), Expect = 9.160e-31
Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            MSGMK +G G GRQVQD SY+IGVLR K+ +   EI++L+ EI QH+ D+ Q   LER +E +L++V+ LEG LADYN+A+DK R   DP E+  +   L   NR++  ++D++FL KQ  +R  +E EEE+E +H
Sbjct:   74 MSGMKTAGQGPGRQVQDPSYYIGVLRAKLTEIATEISKLKREINQHQTDSAQYSGLERKYEELLKEVRNLEGTLADYNLAMDKVRMHTDPTEVEAYQKQLAAKNRRDAQEVDQVFLRKQGRDRATREAEEEVERIH 209          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A7S3HDQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDQ6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.990e-24
Identity = 58/136 (42.65%), Postives = 89/136 (65.44%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            + GMKA G   GR VQD +YF+G+LR KIND   E  RL+ E++Q  RD  Q   LE+ +E ++++ + LEG LADYN+A+DK RT+ DP ++ +    + + NR+    +D IF+ +++ E E Q IEE++EA +
Sbjct:   67 VKGMKAQGGNTGRLVQDSAYFVGLLRKKINDVNTESMRLRQEMDQQSRDNSQYVQLEKRYENLVKNKETLEGQLADYNLALDKTRTSTDPEDVQQMALHMAEKNRQAGQDLDRIFMQRKQRETETQNIEEQIEAQY 202          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A8J2SUY1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUY1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.400e-24
Identity = 56/136 (41.18%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            M GMK + HG  R+VQD SY++GVLR K+ +   EI  LQTE +QHER   + G L++  +++L  V++LEG LADYN+A+DKAR + DP EL  ++      N++   ++D IF+ K++ + E ++++ +++ VH
Sbjct:   42 MRGMKTT-HGPARKVQDSSYYVGVLRNKVTELTTEIYSLQTEHKQHERSVNEHGGLQKHHDSLLNRVRILEGTLADYNLALDKARVSTDPVELDEYISGFRAKNKQFANEVDRIFVIKKQKDEETKKLDTQIQEVH 176          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: F0YK18_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK18_AURAN)

HSP 1 Score: 100 bits (248), Expect = 6.580e-24
Identity = 56/137 (40.88%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTT-VDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            M GMK +  G  RQVQD SY++G+LR K+ +   EI  LQ+E +QHER   + G L++  E +L +V+ LEG LADYN+A+DKAR    DP EL  ++ +    N++   +ID +F+ K++ + E ++IE ++  +H
Sbjct:   27 MRGMKTA-QGPARQVQDSSYYVGILRSKVTELMNEIQSLQSEHKQHERSMNEYGGLQKRHENLLNEVRALEGTLADYNLAMDKARMVGTDPAELNDYITEFRAKNKQFANEIDRVFVIKKQKDEETKQIEAQIRDLH 162          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A6G0WPH1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPH1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.660e-23
Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            M GM+    G GRQVQD SYF G L  K  +  +EI+++  EIEQ  +D  Q   LE+ +E +  +V+ LEG LADYN+A+DK R+  DP E+ +    L   N KE  ++D IF+ +Q  ER ++  E+E+ A+H
Sbjct:   88 MMGMRVMTAGPGRQVQDASYFTGKLHQKTAEITSEIDKINKEIEQDAKDKSQYAQLEKKYEHLAIEVRDLEGQLADYNLAMDKLRSATDPAEIRQVQEQLHHRNMKEAEEVDRIFIMRQEQERTSKHFEDEINAIH 223          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A421GI98_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GI98_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.380e-23
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            M GM+    G GRQVQD S+F G L  K  +  +EI +LQ EIEQ  +D  Q   LER +ET+  +V+ LEG LADYN+A+DK R+  DP E+ +    L   N +E   +D +F+ +Q  E+  + +E+EM  +H
Sbjct:  220 MMGMRVGSAGPGRQVQDASFFKGKLHSKTAEITSEIEKLQREIEQDAKDKAQYAQLERKYETLAIEVRDLEGQLADYNLAMDKMRSATDPAEIRQVQEQLHQRNAREAEDVDRVFILRQEQEKNVRRMEDEMTEIH 355          
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A2D4BMD9_PYTIN (Intraflagellar Transport Protein 72/74 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMD9_PYTIN)

HSP 1 Score: 103 bits (257), Expect = 4.620e-23
Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 0
Query:    1 MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 136
            M GM+    G GRQVQD SYF+G L  K  +  +EI+RL+ EIEQ  +D  Q   LER +E++  +V+ LEG LADYN+A+DK R+  DP E+ +    L   N KE  ++D IF+ +Q  E   + +E EM  +H
Sbjct:   90 MMGMRVGTAGPGRQVQDTSYFMGKLHAKTTEITSEIDRLRKEIEQDAKDKSQYAQLERKYESLAVEVRDLEGQLADYNLAMDKLRSATDPAEIRQVQEQLHHRNGKEAEEVDRIFILRQEQESAVRRMEGEMNEIH 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE8_ECTSI9.260e-5368.31Intraflagellar transpot protein 74 n=1 Tax=Ectocar... [more]
A0A6H5JUN2_9PHAE4.160e-4454.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE00_9STRA7.630e-3453.28Intraflagellar transport protein 74 n=1 Tax=Tribon... [more]
A0A6V2XWW9_HETAK9.160e-3148.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3HDQ6_9STRA2.990e-2442.65Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8J2SUY1_9STRA4.400e-2441.18Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YK18_AURAN6.580e-2440.88Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6G0WPH1_9STRA1.660e-2341.91Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A421GI98_9STRA3.380e-2341.91Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2D4BMD9_PYTIN4.620e-2343.38Intraflagellar Transport Protein 72/74 n=1 Tax=Pyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..136
NoneNo IPR availableCOILSCoilCoilcoord: 22..49
IPR029602Intraflagellar transport protein 74PANTHERPTHR31432FAMILY NOT NAMEDcoord: 1..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172820contigH-elongata_contig172820:572..1225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172820.4473.1mRNA_H-elongata_contig172820.4473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172820 563..1225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172820.4473.1 ID=prot_H-elongata_contig172820.4473.1|Name=mRNA_H-elongata_contig172820.4473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDA
LQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDL
EDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029602IFT74