prot_H-elongata_contig172329.4455.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172329.4455.1
Unique Nameprot_H-elongata_contig172329.4455.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 7.120e-75
Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKVSL 134
            QVVALSEYRLQLS+YLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQA PK+KGKISRVLAAKCALAIRVDALADETDTTIG+ESRSKV +
Sbjct:  263 QVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEM 396          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A383VYQ8_TETOB (Nop domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYQ8_TETOB)

HSP 1 Score: 218 bits (555), Expect = 3.070e-69
Identity = 112/132 (84.85%), Postives = 122/132 (92.42%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QV+ LSEYR QL DYL+SRM A+APNLT++VGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ+ PKHKGKISRVLAAKCALAIRVDAL D TD  +G E+R+KV
Sbjct:   19 QVIELSEYRGQLFDYLKSRMAAVAPNLTVLVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSQPKHKGKISRVLAAKCALAIRVDALGDTTDAAVGTEARAKV 150          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: H3G5X2_PHYRM (Nop domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5X2_PHYRM)

HSP 1 Score: 213 bits (541), Expect = 1.510e-67
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QV++L+EYR QL DYL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAK ALA+RVDAL D T+ TIG ++R+KV
Sbjct:    8 QVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKV 139          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A7S1D2T7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2T7_CYCTE)

HSP 1 Score: 209 bits (533), Expect = 4.240e-67
Identity = 110/134 (82.09%), Postives = 126/134 (94.03%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADET--DTTIGLESRSKV 132
            QV++++EYR QL +YLR+RM AIAPNLTI+VGELVGARLI+HAGSL+NLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASL+GQA+PK+KGK+SRVLAAK ALAIRVDAL+D+T  DTTIG E R+KV
Sbjct:   49 QVLSMTEYRSQLWEYLRNRMNAIAPNLTILVGELVGARLISHAGSLLNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLVGQASPKNKGKMSRVLAAKSALAIRVDALSDDTTPDTTIGYEGRAKV 182          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A7S0IQK4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IQK4_9EUKA)

HSP 1 Score: 218 bits (554), Expect = 1.670e-66
Identity = 111/132 (84.09%), Postives = 124/132 (93.94%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QV++LSEYR QL DYL++RMQAIAPNL++MVGELVGARLIAHAGSL+NLAKQPASTVQILGAEKALFRALK KHDTPKYGLIYHASL+GQA PKHKGKISRVLAAKCAL+IRVDAL + ++ TIG E+RSKV
Sbjct:  279 QVISLSEYRSQLWDYLKNRMQAIAPNLSVMVGELVGARLIAHAGSLMNLAKQPASTVQILGAEKALFRALKAKHDTPKYGLIYHASLVGQAQPKHKGKISRVLAAKCALSIRVDALGESSNATIGFEARSKV 410          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A383VYS5_TETOB (Nop domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VYS5_TETOB)

HSP 1 Score: 218 bits (555), Expect = 1.920e-66
Identity = 112/132 (84.85%), Postives = 122/132 (92.42%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QV+ LSEYR QL DYL+SRM A+APNLT++VGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKH+TPKYGLIYHASLIGQ+ PKHKGKISRVLAAKCALAIRVDAL D TD  +G E+R+KV
Sbjct:  258 QVIELSEYRGQLFDYLKSRMAAVAPNLTVLVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHETPKYGLIYHASLIGQSQPKHKGKISRVLAAKCALAIRVDALGDTTDAAVGTEARAKV 389          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A662YE82_9STRA (Nop domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YE82_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.570e-66
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QV++L+EYR QL DYL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAK ALA+RVDAL D T+ TIG ++R+KV
Sbjct:   93 QVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKV 224          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A7S0NG10_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NG10_9EUKA)

HSP 1 Score: 218 bits (554), Expect = 2.590e-66
Identity = 113/132 (85.61%), Postives = 122/132 (92.42%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QVV+LSEYR QL DYLR+RMQAIAPNLT +VGELVGARLIAHAGSL+NLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASL+GQA PKHKGKISRVLAAKCAL+IRVDAL D ++ T+G E R KV
Sbjct:  262 QVVSLSEYRAQLWDYLRNRMQAIAPNLTTVVGELVGARLIAHAGSLMNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLVGQAEPKHKGKISRVLAAKCALSIRVDALGDTSEPTVGYEGRLKV 393          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.920e-66
Identity = 111/132 (84.09%), Postives = 124/132 (93.94%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QVVALSEYR+QL DYL++RM AIAPNLTI+VGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PK+KGK+SRVLAAK ALA+RVDA+ + TDTT+GLESR+KV
Sbjct:  263 QVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKVSRVLAAKTALAVRVDAMGETTDTTLGLESRAKV 394          
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Match: A0A7S3WLX5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WLX5_9SPIT)

HSP 1 Score: 214 bits (545), Expect = 1.000e-65
Identity = 109/132 (82.58%), Postives = 123/132 (93.18%), Query Frame = 0
Query:    1 QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKISRVLAAKCALAIRVDALADETDTTIGLESRSKV 132
            QV++LSEYR QL DYL++RM AIAPNL++MVGELVGARLIAHAGSL+NLAKQPASTVQILGAEKALFRALK KHDTPKYGLIYHASL+GQA PKHKGKISRVLAAKCAL+IRVDAL + ++ TIGL++R KV
Sbjct:  225 QVISLSEYRAQLFDYLKNRMHAIAPNLSVMVGELVGARLIAHAGSLMNLAKQPASTVQILGAEKALFRALKAKHDTPKYGLIYHASLVGQAQPKHKGKISRVLAAKCALSIRVDALGETSNATIGLDARLKV 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172329.4455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXU6_ECTSI7.120e-7595.52Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A383VYQ8_TETOB3.070e-6984.85Nop domain-containing protein n=1 Tax=Tetradesmus ... [more]
H3G5X2_PHYRM1.510e-6782.58Nop domain-containing protein n=1 Tax=Phytophthora... [more]
A0A7S1D2T7_CYCTE4.240e-6782.09Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S0IQK4_9EUKA1.670e-6684.09Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A383VYS5_TETOB1.920e-6684.85Nop domain-containing protein n=2 Tax=Scenedesmace... [more]
A0A662YE82_9STRA2.570e-6682.58Nop domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A7S0NG10_9EUKA2.590e-6685.61Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A835YZD1_9STRA2.920e-6684.09Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3WLX5_9SPIT1.000e-6582.58Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002687Nop domainPFAMPF01798Nopcoord: 1..132
e-value: 1.1E-54
score: 185.3
IPR002687Nop domainPROSITEPS51358NOPcoord: 23..134
score: 36.301
IPR042239Nop, C-terminal domainGENE3D1.10.246.90coord: 11..133
e-value: 4.8E-53
score: 180.1
NoneNo IPR availablePANTHERPTHR10894:SF1NUCLEOLAR PROTEIN 58coord: 1..132
NoneNo IPR availablePANTHERPTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58coord: 1..132
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 2..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172329contigH-elongata_contig172329:231..1107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172329.4455.1mRNA_H-elongata_contig172329.4455.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172329 231..1107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172329.4455.1 ID=prot_H-elongata_contig172329.4455.1|Name=mRNA_H-elongata_contig172329.4455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
QVVALSEYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLA
KQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQANPKHKGKIS
RVLAAKCALAIRVDALADETDTTIGLESRSKVSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002687Nop_dom
IPR042239Nop_C
IPR036070Nop_dom_sf