prot_H-elongata_contig172246.4451.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172246.4451.1
Unique Nameprot_H-elongata_contig172246.4451.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
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BLAST of mRNA_H-elongata_contig172246.4451.1 vs. uniprot
Match: D7FQM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM3_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 4.780e-78
Identity = 121/133 (90.98%), Postives = 123/133 (92.48%), Query Frame = 0 
Query:    1 MVRGMVDQQTSQIRDAADVGEKVDATAEGLFREHFVWLLDLWVQVKSLAPTRLFIAISWASLVDVQARVSKGKGSTKEASNFTLARFASWAPRLKAWINHKDIQKVARTSGRNTKRTTHELSSTAFLCGRRRR 133
            MVRGMVDQQTSQIRDAADVGEKVDA AEGLFREHF WLLDLW+QVKSLAPTRLF A SWA LVDVQARVSKGKGSTKEASNFTLARFASWAPRLKAWINH+DIQKVARTSGRNTKRT    SST FLCGRRRR
Sbjct:   31 MVRGMVDQQTSQIRDAADVGEKVDAAAEGLFREHFPWLLDLWIQVKSLAPTRLFNATSWALLVDVQARVSKGKGSTKEASNFTLARFASWAPRLKAWINHEDIQKVARTSGRNTKRTR---SSTVFLCGRRRR 160
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BLAST of mRNA_H-elongata_contig172246.4451.1 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.430e-16
Identity = 57/118 (48.31%), Postives = 70/118 (59.32%), Query Frame = 0 
Query:    1 MVRGMVDQQTSQIRDAADVGEKVDATAEGLFREHFVWLLDLWVQ------VKSLAPTRLFIAISWASLVDVQARVSKGKGSTKE-ASNFTLARFASWAPRLKA----WINHKDIQKVA 107
            MVRGMVDQQTSQIRDAADVGEKVDA AEGLFREHF WLLDL VQ      V+      L I +S+    D + RV+K +       S + L++  +   R K     W++  D+ K A
Sbjct:  126 MVRGMVDQQTSQIRDAADVGEKVDAAAEGLFREHFPWLLDLGVQELYGVFVRKKKEANL-IKLSYP---DKKTRVTKPRAKVLYYISGWLLSKVWTHVRRQKIEEREWVSFVDLNKSA 239
[Close]
BLAST of mRNA_H-elongata_contig172246.4451.1 vs. uniprot
Match: D8LQS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS2_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.960e-12
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MVRGMVDQQTSQIRDAADVGEKVDATAEGLFREHF 35
            MVRGMVDQQTSQIRDAA VGEKVDA AEGLFREHF
Sbjct:   31 MVRGMVDQQTSQIRDAAHVGEKVDAAAEGLFREHF 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172246.4451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQM3_ECTSI4.780e-7890.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVM7_ECTSI2.430e-1648.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQS2_ECTSI3.960e-1294.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172246contigH-elongata_contig172246:181..990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172246.4451.1mRNA_H-elongata_contig172246.4451.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172246 64..1008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172246.4451.1 ID=prot_H-elongata_contig172246.4451.1|Name=mRNA_H-elongata_contig172246.4451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MVRGMVDQQTSQIRDAADVGEKVDATAEGLFREHFVWLLDLWVQVKSLAP
TRLFIAISWASLVDVQARVSKGKGSTKEASNFTLARFASWAPRLKAWINH
KDIQKVARTSGRNTKRTTHELSSTAFLCGRRRR*
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