prot_H-elongata_contig172131.4446.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig172131.4446.1
Unique Nameprot_H-elongata_contig172131.4446.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length129
Homology
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 4.140e-57
Identity = 104/131 (79.39%), Postives = 115/131 (87.79%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRDLKGGEMLRRIRDFAGTGG--DETSRQIHIFLFHQVRDYYLDL 129
            L  RVLPLC+NYVRV+RFA+ER QYEFGKVAHALAAG+QRLLREYLVLVAQLE+QLLQGKLSLQRLWFYVQPSMRTME+LEALTVELRD KGGEMLRR+R   GTGG  DE SRQ++ FL HQ    YL++
Sbjct:  692 LAERVLPLCNNYVRVNRFASERAQYEFGKVAHALAAGVQRLLREYLVLVAQLESQLLQGKLSLQRLWFYVQPSMRTMESLEALTVELRDSKGGEMLRRLRALGGTGGGGDEASRQLYTFLLHQASVPYLEM 822          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A835ZJD2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJD2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.150e-36
Identity = 72/129 (55.81%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRDLKGGEMLRRIRDFAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            L  R+LPLCS YVRVSRF  +R + EFG VAHAL+A M+ LL+EYLVLVAQLE QL +G LSLQRLWFY+QP++RTM  L+ +  E + LKGG+++ R+RD + +GG+  SR +++FL  +    YLD+
Sbjct:  499 LAERMLPLCSCYVRVSRFVLDRSRSEFGLVAHALSAAMRLLLKEYLVLVAQLEGQLRRGALSLQRLWFYLQPTLRTMGDLDKVCQESQGLKGGQLVNRLRDMSRSGGNSGSRHLYLFLLQRACVPYLDM 627          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A2R5GGM5_9STRA (Gamma-tubulin complex component 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGM5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.150e-28
Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRDLKGGEMLRRIRDFAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            L +RV+PLCS+Y   S F   R + EFG+V+HA+AA M+ LLREY VLVAQLE+Q  + +LSLQ+LWFYVQPSMR ++ L  +  +     GG +L  + D A  GGD  +R ++ +L       YL++
Sbjct:  609 LSSRVMPLCSDYEAASSFVQRRSRPEFGRVSHAMAAAMRALLREYDVLVAQLEHQNSERRLSLQKLWFYVQPSMRVLQVLANVARKSEAATGGVLLNLVHDLASRGGDAKARSVYHYLVQHATVPYLEM 737          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A7S2WAJ6_9STRA (Spindle pole body component n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAJ6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.450e-27
Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRDLKGGEMLRRIRDFAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            L + +LP+C  YV  + F   R + EFG+V+HALAA M+ LLREY VL+AQLENQ    +L+LQ+LWFYVQPSMRT++ L  +  +     GG +L  I   A  GGD  SR ++ +L       YL++
Sbjct:  457 LASLILPMCGQYVTTNDFILRRSRAEFGRVSHALAAAMRNLLREYQVLIAQLENQQQMHQLTLQKLWFYVQPSMRTLQTLSTVAKKSATATGGSLLNVIHKLASRGGDAKSRSVYHYLVQNATVPYLEM 585          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A7RR43_NEMVE (Gamma-tubulin complex component (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RR43_NEMVE)

HSP 1 Score: 110 bits (275), Expect = 1.320e-25
Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    3 NRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRD--LKGGEMLRRIRD-FAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            +R+LP+CS+Y  + RF  E+  +E+G V HAL A M+ LL+EYL+LVAQLE+Q   G+LSLQ+LWFY+QP +RTME L A+ V +     KGG +L  + +      GD  ++ + +FL       YLDL
Sbjct:   95 HRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLLHEKTVALTGDSKAQDLCLFLTQAACAPYLDL 224          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: UPI00138FDB9E (gamma-tubulin complex component 2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FDB9E)

HSP 1 Score: 110 bits (275), Expect = 1.370e-25
Identity = 59/130 (45.38%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    3 NRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRD--LKGGEMLRRIRD-FAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            +R+LP+CS+Y  + RF  E+  +E+G V HAL A M+ LL+EYL+LVAQLE+Q   G+LSLQ+LWFY+QP +RTME L A+ V +     KGG +L  + +      GD  ++ + +FL       YLDL
Sbjct:  271 HRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLLHEKTVALTGDSKAQDLCLFLTQAACAPYLDL 400          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A7S1EKM6_HEMAN (Spindle pole body component (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EKM6_HEMAN)

HSP 1 Score: 102 bits (255), Expect = 1.570e-25
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVEL 87
            L  RVLPL ++YVRV RF   R  YE+G V HA  + MQ L+REYL+L+AQLE Q   GKL+LQ+LWFYVQP+MRTM  L  L +E+
Sbjct:   46 LVTRVLPLATSYVRVVRFIEMREHYEYGMVNHAFCSAMQELVREYLILIAQLETQFNAGKLTLQKLWFYVQPTMRTMRVLSDLVIEV 132          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A7S2RS59_9STRA (Spindle pole body component (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS59_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.660e-25
Identity = 54/112 (48.21%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   18 FANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRDLKGGEMLRRIRDFAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            F  E+ +YE G VAHALA+GM+ L++EYLVL+AQLE+Q    +LSLQ+LWFY+QP+M+TM  L+ +   ++   GGE+L R++  A  GGDE S ++  FL  +    YLD+
Sbjct:    3 FIKEQVRYERGMVAHALASGMRVLVKEYLVLLAQLEHQHRLEQLSLQKLWFYIQPAMQTMLLLQDIARRVKGAAGGELLNRLQGAAELGGDEKSAEVTHFLLTRASAPYLDM 114          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A3M6TQJ9_POCDA (Gamma-tubulin complex component n=5 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TQJ9_POCDA)

HSP 1 Score: 109 bits (273), Expect = 2.540e-25
Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELR--DLKGGEMLRRIRD-FAGTGGDETSRQIHIFLFHQVRDYYLDL 129
            L  R+LP+CSNY  + RF   +  +E G V HAL A M+ LL+EYL+LVAQLE+Q   G+LSLQ+LWFY+QP MRTME L +++V +     KGG +L  + +   G  GD  S+ + +FL       Y D+
Sbjct:  269 LVQRILPVCSNYSTICRFMEAKSSFEHGLVNHALCAAMRTLLKEYLILVAQLEHQFRLGQLSLQKLWFYIQPCMRTMEILSSISVAIDKGSCKGGAVLTLLHEKTVGYTGDRKSQDLCLFLTQAACVPYFDI 400          
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Match: A0A8C5Q9A9_9ANUR (Gamma-tubulin complex component n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5Q9A9_9ANUR)

HSP 1 Score: 108 bits (271), Expect = 2.580e-25
Identity = 56/132 (42.42%), Postives = 87/132 (65.91%), Query Frame = 0
Query:    1 LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVAQLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELR--DLKGGEMLRRIRDFA-GTGGDETSRQIHIFLFHQVRDYYLDL 129
            L NR+LP+ ++Y  V+RF  E+  +E+G+V HALAA M+ L++EY++L+ QLE+Q  QG LSLQ+LWFY+QP++RTME L +L+  L   +  GG  L  + D   G  GD  ++++ ++L       Y D+
Sbjct:  259 LVNRILPMATSYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEYMILITQLEHQQRQGLLSLQKLWFYIQPTLRTMEVLASLSTSLDKGECLGGATLSLLHDRTFGYTGDSQAQELSLYLTKAASAPYFDI 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172131.4446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBZ5_ECTSI4.140e-5779.39Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A835ZJD2_9STRA3.150e-3655.81Spc98 family-domain-containing protein n=1 Tax=Tri... [more]
A0A2R5GGM5_9STRA7.150e-2846.51Gamma-tubulin complex component 2 n=1 Tax=Hondaea ... [more]
A0A7S2WAJ6_9STRA2.450e-2745.74Spindle pole body component n=1 Tax=labyrinthulid ... [more]
A7RR43_NEMVE1.320e-2545.38Gamma-tubulin complex component (Fragment) n=1 Tax... [more]
UPI00138FDB9E1.370e-2545.38gamma-tubulin complex component 2 n=1 Tax=Nematost... [more]
A0A7S1EKM6_HEMAN1.570e-2558.62Spindle pole body component (Fragment) n=1 Tax=Hem... [more]
A0A7S2RS59_9STRA1.660e-2548.21Spindle pole body component (Fragment) n=1 Tax=Rhi... [more]
A0A3M6TQJ9_POCDA2.540e-2545.45Gamma-tubulin complex component n=5 Tax=Pocillopor... [more]
A0A8C5Q9A9_9ANUR2.580e-2542.42Gamma-tubulin complex component n=2 Tax=Leptobrach... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availablePANTHERPTHR19302:SF13GAMMA-TUBULIN COMPLEX COMPONENT 2coord: 2..113
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 2..128
e-value: 3.2E-27
score: 96.0
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 2..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172131contigH-elongata_contig172131:160..818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172131.4446.1mRNA_H-elongata_contig172131.4446.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig172131 160..818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig172131.4446.1 ID=prot_H-elongata_contig172131.4446.1|Name=mRNA_H-elongata_contig172131.4446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp
LQNRVLPLCSNYVRVSRFANERGQYEFGKVAHALAAGMQRLLREYLVLVA
QLENQLLQGKLSLQRLWFYVQPSMRTMEALEALTVELRDLKGGEMLRRIR
DFAGTGGDETSRQIHIFLFHQVRDYYLDL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041470GCP_N
IPR007259GCP