prot_H-elongata_contig171774.4421.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171774.4421.1
Unique Nameprot_H-elongata_contig171774.4421.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig171774.4421.1 vs. uniprot
Match: A0A6H5L2Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y8_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.080e-40
Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    1 MAVPPSFLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHRGDKVFVLGKPPAL 70
            MAVPPS LGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLH GD+VF+LG+PP L
Sbjct:   67 MAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 136          
BLAST of mRNA_H-elongata_contig171774.4421.1 vs. uniprot
Match: D7FKC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC7_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.890e-36
Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    1 MAVPPSFLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHRGDKVFVLGKPPAL 70
            MAVPPS LGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLH GD+VF+LG+PP L
Sbjct: 1575 MAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 1644          
BLAST of mRNA_H-elongata_contig171774.4421.1 vs. uniprot
Match: A0A7S1XKF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKF3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.590e-23
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 MAVPPSFLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHRGDKVFVLGKP 67
            M VPP    HS+GE++Q L APPL  VA  L R  GT+N+ EPYVYT PRADTVLH GD+VFVLG+P
Sbjct:   23 MKVPPELYQHSYGELYQELVAPPLNLVALGLYRTAGTKNSVEPYVYTAPRADTVLHEGDRVFVLGEP 89          
BLAST of mRNA_H-elongata_contig171774.4421.1 vs. uniprot
Match: F0Z7T9_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z7T9_DICPU)

HSP 1 Score: 50.4 bits (119), Expect = 1.840e-5
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0
Query:    3 VPPSFLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHRGDKVFVLGKP 67
            VP  + GH + E+F+ L    +  +   L R +    AP PYV+T P +DT+LH  D V++L +P
Sbjct: 1140 VPSQYHGHLYSELFETLIHKNI--LPLGLYRCKEITGAPNPYVFTCPPSDTILHENDLVYILYRP 1202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171774.4421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L2Y8_9PHAE1.080e-4091.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKC7_ECTSI1.890e-3691.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XKF3_9STRA1.590e-2364.18Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0Z7T9_DICPU1.840e-536.92Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171774contigH-elongata_contig171774:172..384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171774.4421.1mRNA_H-elongata_contig171774.4421.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171774 151..384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171774.4421.1 ID=prot_H-elongata_contig171774.4421.1|Name=mRNA_H-elongata_contig171774.4421.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MAVPPSFLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPR
ADTVLHRGDKVFVLGKPPAL*
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