prot_H-elongata_contig171719.4417.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171719.4417.1
Unique Nameprot_H-elongata_contig171719.4417.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
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BLAST of mRNA_H-elongata_contig171719.4417.1 vs. uniprot
Match: A0A6H5KYQ7_9PHAE (Zeta_toxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 7.400e-20
Identity = 69/186 (37.10%), Postives = 92/186 (49.46%), Query Frame = 0 
Query:    1 VWAPEDQVLARAARRATQTGRVIPPSILLETIHAVPRSVEKLAPLTDYCVRIDNDGDI----VEQAPDFPLSGPLLPSTAAAAAAAKSSEINLNGAYDGGCLSPAYGGLRVGSEEI------------------------AGDGGDDGRTVVPAGEIYPRVLAGSRAGFPVLATPGETWETFRRTF 158
            VWAPE++V+ RA RR   TGRVIPP++L +TI AVPRSVE LAPL DYCVRIDN GD      +++       PL    +   ++  S  + +  +             R+ S ++                        A +GG +GR+   A    P V+       PVLAT GETWE+FRRTF
Sbjct:  322 VWAPEEEVMKRAVRRGLTTGRVIPPALLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDGWRQSQESQQQQSRRPLRQHNSCLVSSEMSDMVMMPTSXXXXXXXXXSASARLQSSDMSEISRPVGSSLDVPTACTGDASRSAAEGGGEGRS--GAHSEVPAVI------MPVLATAGETWESFRRTF 499
[Close]
BLAST of mRNA_H-elongata_contig171719.4417.1 vs. uniprot
Match: D7FLS0_ECTSI (Zeta_toxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLS0_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.620e-19
Identity = 74/193 (38.34%), Postives = 94/193 (48.70%), Query Frame = 0 
Query:    1 VWAPEDQVLARAARRATQTGRVIPPSILLETIHAVPRSVEKLAPLTDYCVRIDNDGD---------------------------------IVEQAPDFPLSGPLLPSTAAAAAAAKSSEIN--LNGAYDGGCLSPAYGGLRVGSEEIAGDGGDDGRTVVPAGEIYPRVLAGSRAGFPVLATPGETWETFRRTF 158
            VWAPE++V+ RA RR   TGRVIPPS+L +TI AVPRSVE LAPL DYCVRIDN GD                                 ++  A +         S++A   ++   EI+  +  + D      A  G    S   A +GG +GR+   A    P V+       PVLAT GETWE+FRRTF
Sbjct:  324 VWAPEEEVMKRAVRRGLTTGRVIPPSVLRDTIRAVPRSVEMLAPLADYCVRIDNVGDDWRRQSQEXXXXXXXXXXXXXXXCLVSSDMSEMVLMPASNEXXXXXXXXSSSARLQSSDMPEISRPVGSSLDVPTACTACTGDETRS---AAEGGGEGRS--RAHSEVPAVI------MPVLATSGETWESFRRTF 505
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171719.4417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYQ7_9PHAE7.400e-2037.10Zeta_toxin domain-containing protein n=1 Tax=Ectoc... [more]
D7FLS0_ECTSI2.620e-1938.34Zeta_toxin domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171719contigH-elongata_contig171719:147..740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171719.4417.1mRNA_H-elongata_contig171719.4417.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171719 147..1230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171719.4417.1 ID=prot_H-elongata_contig171719.4417.1|Name=mRNA_H-elongata_contig171719.4417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
VWAPEDQVLARAARRATQTGRVIPPSILLETIHAVPRSVEKLAPLTDYCV
RIDNDGDIVEQAPDFPLSGPLLPSTAAAAAAAKSSEINLNGAYDGGCLSP
AYGGLRVGSEEIAGDGGDDGRTVVPAGEIYPRVLAGSRAGFPVLATPGET
WETFRRTFQYHGRPSQETVPEDGGVPSLPSDRLATVAAGDKQELPAF*
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