prot_H-elongata_contig171601.4411.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171601.4411.1
Unique Nameprot_H-elongata_contig171601.4411.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length36
Homology
[Close]
BLAST of mRNA_H-elongata_contig171601.4411.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 1.380e-5
Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 0 
Query:    3 QEAEHQGDFRYDWVVHTRFDLAWVRPLPPLRHFS 36
            +E      F YDWV+  R D+AW RPLPPLR FS
Sbjct:  139 EEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFS 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171601.4411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK46_ECTSI1.380e-555.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171601contigH-elongata_contig171601:215..322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171601.4411.1mRNA_H-elongata_contig171601.4411.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171601 215..322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171601.4411.1 ID=prot_H-elongata_contig171601.4411.1|Name=mRNA_H-elongata_contig171601.4411.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=36bp
MVQEAEHQGDFRYDWVVHTRFDLAWVRPLPPLRHFS
back to top