prot_H-elongata_contig171188.4391.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171188.4391.1
Unique Nameprot_H-elongata_contig171188.4391.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: D7FNU5_ECTSI (Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU5_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 3.580e-38
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            A+ +GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC
Sbjct:   34 AMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: L8GYQ9_ACACA (Elongin-C n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYQ9_ACACA)

HSP 1 Score: 97.1 bits (240), Expect = 1.000e-24
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    5 GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLD 66
            G F E A G+++F EISTPILEKVIQ+ YYK+RYTNS T IPEF IEPE+ALELLMAANFLD
Sbjct:   41 GTFTEQAMGEINFREISTPILEKVIQYFYYKLRYTNSTTEIPEFPIEPEVALELLMAANFLD 102          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: F0YER3_AURAN (Elongin-C (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER3_AURAN)

HSP 1 Score: 95.1 bits (235), Expect = 4.260e-24
Identity = 43/57 (75.44%), Postives = 51/57 (89.47%), Query Frame = 0
Query:   11 ASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            +SG++ F EISTPILEKVIQ+ YYK+RYTNS  RIPEF I+PE+ALELLMA+NFLDC
Sbjct:   36 SSGEIKFPEISTPILEKVIQYFYYKLRYTNSQVRIPEFQIDPEMALELLMASNFLDC 92          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: K8Z122_NANGC (Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z122_NANGC)

HSP 1 Score: 94.4 bits (233), Expect = 1.040e-23
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            A+ AG F E+  G+++F EIST ILEKVIQ++YYKVRYTNS  ++P+F +EPE+ALELLMAANFLDC
Sbjct:   34 AMLAGNFAES-KGEINFPEISTNILEKVIQYLYYKVRYTNSPQKVPDFKMEPEIALELLMAANFLDC 99          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: A0A1Y1IDM0_KLENI (Elongin-C n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDM0_KLENI)

HSP 1 Score: 92.8 bits (229), Expect = 4.880e-23
Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    5 GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSAT--RIPEFHIEPELALELLMAANFLDC 67
            GGF E   G+V F EISTPILEK+ QF YYK+RYTNSA    +PEF IEPE+A+ELLMA+NFLDC
Sbjct:   40 GGFQETELGEVRFPEISTPILEKLCQFFYYKLRYTNSAAVKNVPEFKIEPEIAIELLMASNFLDC 104          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: A0A6U1KLA4_9STRA (Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLA4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.060e-23
Identity = 47/67 (70.15%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            A+ +G F E+ SG++ F EISTPILEKVIQ+ YYK  Y NS  RIPEF IEPE+ALELLMAANFLDC
Sbjct:   53 AMLSGSFTES-SGEIKFPEISTPILEKVIQYFYYKASYKNSQVRIPEFAIEPEVALELLMAANFLDC 118          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: A0A7S2XYA0_9STRA (Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 7.120e-23
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            A+ +G F E+  G+V F EIS+ ILEK+IQ+ YYKVRYTNS +RIP+F IEPE+ALELLMAANFLDC
Sbjct:   40 AMLSGQFAESR-GEVTFPEISSAILEKIIQYCYYKVRYTNSTSRIPDFPIEPEIALELLMAANFLDC 105          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: A0A1V9Z8H2_9STRA (Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z8H2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 5.220e-22
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            A+ +G F E+  G+V F +IS PILEKVIQ++YYK RY+NS  RIP+F IEPE+ALELLMAAN+LDC
Sbjct:   36 AMLSGHFSES-KGEVRFPDISAPILEKVIQYMYYKKRYSNSNARIPDFGIEPEMALELLMAANYLDC 101          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: A0A6B2LUV1_9EUKA (Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LUV1_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 7.980e-22
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    2 LRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLD 66
            L  GGF E+ +G++ F EI+T ILEKVIQ+ YYKV+YTNS  + P+F IEPE+ALELLMAANFLD
Sbjct:   26 LDGGGFLESEAGEISFKEINTNILEKVIQYFYYKVKYTNSTGQTPDFPIEPEIALELLMAANFLD 90          
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Match: A0A6G0WB49_9STRA (Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB49_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.240e-21
Identity = 42/67 (62.69%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 67
            A+  G F E+  G+V F +IS PILEK+IQ+ Y+KVRY+NS  R+P+F IEPE+ALELLMAAN+LDC
Sbjct:   38 AMLTGHFSES-KGEVRFPDISAPILEKIIQYFYFKVRYSNSNARLPDFTIEPEIALELLMAANYLDC 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171188.4391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU5_ECTSI3.580e-3895.52Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN... [more]
L8GYQ9_ACACA1.000e-2475.81Elongin-C n=1 Tax=Acanthamoeba castellanii str. Ne... [more]
F0YER3_AURAN4.260e-2475.44Elongin-C (Fragment) n=1 Tax=Aureococcus anophagef... [more]
K8Z122_NANGC1.040e-2367.16Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A1Y1IDM0_KLENI4.880e-2369.23Elongin-C n=1 Tax=Klebsormidium nitens TaxID=10523... [more]
A0A6U1KLA4_9STRA5.060e-2370.15Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=356... [more]
A0A7S2XYA0_9STRA7.120e-2368.66Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 ... [more]
A0A1V9Z8H2_9STRA5.220e-2265.67Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID... [more]
A0A6B2LUV1_9EUKA7.980e-2266.15Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864... [more]
A0A6G0WB49_9STRA2.240e-2162.69Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=1008... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 1..67
e-value: 2.9E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR20648:SF0ELONGIN-Ccoord: 4..67
IPR039948Elongin-CPANTHERPTHR20648FAMILY NOT NAMEDcoord: 4..67
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 6..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171188contigH-elongata_contig171188:63..1195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171188.4391.1mRNA_H-elongata_contig171188.4391.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171188 63..1195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171188.4391.1 ID=prot_H-elongata_contig171188.4391.1|Name=mRNA_H-elongata_contig171188.4391.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
ALRAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHI
EPELALELLMAANFLDC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039948ELC1
IPR011333SKP1/BTB/POZ_sf