prot_H-elongata_contig170939.4381.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig170939.4381.1
Unique Nameprot_H-elongata_contig170939.4381.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A1Y1MJE9_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MJE9_PHOPY)

HSP 1 Score: 72.4 bits (176), Expect = 5.050e-13
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFE 75
            I I++DN+  I+MA     +RRT+++DIKHH +RD +  E +HI+Y+ S EQ ADILTKS+S+  FE
Sbjct:  912 IVINEDNQSCIRMAST-LETRRTKHIDIKHHYIRDCVESERIHIQYIPSNEQQADILTKSLSLSKFE 977          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5KQX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 3.140e-11
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            IK+ +DN+G + + +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  +  E H K L
Sbjct:   32 IKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKLEYHRKAL 104          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5JFV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV7_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.240e-11
Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    6 DVAIKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            +  IK+ +DN+G + + +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  + FE H K L
Sbjct:  183 EAKIKVLEDNKGALALIENPFSSARSKHIDVRFHYIRELFKSGKITAEYVPTGEQHADMLTKVLGREKFEYHRKAL 258          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A5N6MP82_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MP82_9ASTR)

HSP 1 Score: 65.9 bits (159), Expect = 9.980e-11
Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    6 DVAIKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFE 75
            ++A+ I  DN  TIK++KN     RT+++D++ H +RD +N EVV++E+ +S EQ ADI+TK + ++ FE
Sbjct:  547 EMAVDIWCDNSSTIKLSKNPVMHSRTKHIDVRFHYLRDLVNQEVVNLEFCKSEEQVADIMTKPLKMEMFE 616          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5K3D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.390e-10
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            IK+ +DN+G + + +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  +  E H K L
Sbjct:  105 IKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKIIAEYVPTGEQHADMLTKVLGRENLEYHRKAL 177          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5JYZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ0_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.020e-10
Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            IK+ +DN+G + + +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  +  + H K L
Sbjct:  107 IKVLEDNKGAVALVENPFSSARSKHIDVRFHFIRELFTSGKITAEYVPTGEQHADMLTKVLGREKLQYHRKAL 179          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5KCC0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.340e-10
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            IK+ +DN+G   + +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  +  E H K L
Sbjct:   29 IKVLEDNKGAPALIENPFSSARSKHIDVRFHFIRELFKSGKITEEYVPTGEQHADMLTKVLGREKLEYHRKAL 101          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.000e-10
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            IK+ +DN+G + M +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  +  E H K L
Sbjct:  296 IKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKSEYHRKAL 368          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.230e-10
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    9 IKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFEKHAKFL 81
            IK+ +DN+G + + +N FSS R++++D++ H +R+      +  EYV +GEQHAD+LTK +  +  E H K L
Sbjct:  333 IKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFESGKITAEYVPTGEQHADMLTKVLGREKLEYHRKAL 405          
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Match: A0A182H6K7_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H6K7_AEDAL)

HSP 1 Score: 62.8 bits (151), Expect = 8.170e-10
Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    6 DVAIKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVVHIEYVRSGEQHADILTKSVSVKTFE 75
            D  I +H+DN+ TI++A++    +R ++VD K H +RD +    +HI +VRS EQ AD++TK +   TF+
Sbjct:  198 DGPIPVHEDNQSTIRIAEDERDCKRLKHVDTKFHFLRDLVLQGKIHISFVRSSEQQADVMTKGLPAATFK 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig170939.4381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1MJE9_PHOPY5.050e-1350.75Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KQX9_9PHAE3.140e-1139.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFV7_9PHAE5.240e-1139.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5N6MP82_9ASTR9.980e-1142.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K3D9_9PHAE1.390e-1039.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYZ0_9PHAE2.020e-1038.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCC0_9PHAE3.340e-1039.73Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWY8_9PHAE6.000e-1041.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXU1_9PHAE6.230e-1039.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182H6K7_AEDAL8.170e-1040.00Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig170939contigH-elongata_contig170939:728..970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig170939.4381.1mRNA_H-elongata_contig170939.4381.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig170939 716..970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig170939.4381.1 ID=prot_H-elongata_contig170939.4381.1|Name=mRNA_H-elongata_contig170939.4381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MNPPIDVAIKIHKDNEGTIKMAKNRFSSRRTRYVDIKHHIVRDAINGEVV
HIEYVRSGEQHADILTKSVSVKTFEKHAKFL
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