prot_H-elongata_contig17057.4364.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17057.4364.1
Unique Nameprot_H-elongata_contig17057.4364.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
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BLAST of mRNA_H-elongata_contig17057.4364.1 vs. uniprot
Match: D7FK91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK91_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 4.670e-84
Identity = 148/292 (50.68%), Postives = 178/292 (60.96%), Query Frame = 0 
Query:    1 AGDGTKARLSLLYLKRTRENIALIQEAHIASQLYHERRWVIKQAAAVMRTCAYASRKSG-GCSHDKLRMWVSATVVAARPSSR-APEQPLTHPGVRCDRCKSGPLKGSCFRCAAGCHAAQKRGSVVRVPP--GELVVGRG----------------ERRARAGTVKEN-----------------------VGEGSYTLCENCFSRRSSFHPPHPFARLRACLADSRLSGPVLYEAICYDCLFGSLVLVRPLKMCEAV-GKAGSGRAGNADIWALPVRVEASGPLSLYQVRS 248
            AGDG KARLSLL+ +RTR N+  +Q AH+  Q  HERRWV++QAAAVMR CAY SR+ G GC+H KLR+W SA +VA + SSR + E+P +H GVRCDRCK GP+ GSCFRCAAGC A        + PP  G+  V  G                E+ +   T+                           G G YTLCE CF  R  FHPPHPFARLR   A+ RLSGPVLYEA+C DC FGSL+LVRPLK  EA  G  GSG  G  D+WA+PVRV+++GPL L Q R+
Sbjct:   73 AGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAYGSRQQGSGCAHTKLRLWTSANLVATKSSSRRSQERPPSHHGVRCDRCKKGPITGSCFRCAAGCTATAVPNDTSKCPPHGGKSGVANGVSRGVRRXXXXXXXXXEKPSPLSTILPRSSGEAPAREERXXXXXXXXXXCGFGNGFYTLCEACFPYRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGG--DLWAVPVRVDSAGPLPLSQARN 362
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17057.4364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK91_ECTSI4.670e-8450.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17057contigH-elongata_contig17057:4358..7154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17057.4364.1mRNA_H-elongata_contig17057.4364.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17057 4358..7154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17057.4364.1 ID=prot_H-elongata_contig17057.4364.1|Name=mRNA_H-elongata_contig17057.4364.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
AGDGTKARLSLLYLKRTRENIALIQEAHIASQLYHERRWVIKQAAAVMRT
CAYASRKSGGCSHDKLRMWVSATVVAARPSSRAPEQPLTHPGVRCDRCKS
GPLKGSCFRCAAGCHAAQKRGSVVRVPPGELVVGRGERRARAGTVKENVG
EGSYTLCENCFSRRSSFHPPHPFARLRACLADSRLSGPVLYEAICYDCLF
GSLVLVRPLKMCEAVGKAGSGRAGNADIWALPVRVEASGPLSLYQVRSRI
AAGDRDDNRGLAFASENWR
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