prot_H-elongata_contig170553.4362.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5L296_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L296_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 4.640e-14 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
GFE + DPCV RKVVDGE ++V++V+ IL A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q Y+ESM+ F
Sbjct: 34 GFEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGDREELFASLNKKFPVKDLGECTWYDGCAIAMDVENCITKLSQTAYIESMLTRF 124
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 6.170e-14 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
G+E + DPCV RKVVDGE ++V++V+ IL A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q Y+ESM++ F
Sbjct: 34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 124
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 7.780e-14 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
G+E + DPCV RKVVDGE ++V++V+ IL A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q YVESM++ F
Sbjct: 34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRF 124
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-13 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
G+E + DPCV RKVVDGE ++V++V+ IL A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q Y+ESM++ F
Sbjct: 103 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRF 193
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5JNU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU5_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.400e-13 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
G+E + DPCV RKVVDGE ++V++V+ IL A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q Y+ESM++ F
Sbjct: 428 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 518
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.400e-13 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
G+E + DPCV RKVVDGE ++V++V+ IL A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q Y+ESM++ F
Sbjct: 670 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 760
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5K2N9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N9_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 3.260e-13 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 0
Query: 2 AAIGFEHG--KADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
A IG +G + DPCV RKVVDGE ++V++V+GIL A D+ + A L KKF +KD+G +Y GC I + + K+ Q Y+ESM++ F
Sbjct: 272 ALIGNGYGQCRVDPCVFRKVVDGEVVGLIVIYVDGILV-AADEGEREELFASLNKKFPVKDLGGCTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 367
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6A3V667_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3V667_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.390e-13 Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 1 MAAIGFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
+ ++GFE ADPCV + +GE E +V ++V+ +L ++ KA + +A + +KF++KD+G AR+ +G I N + R L I Q Y ES+++TF
Sbjct: 273 LKSMGFEPADADPCVYTR-GEGEDECIVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTF 367
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.490e-13 Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 1 MAAIGFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
+ ++GFE ADPCV + +GE E +V ++V+ +L ++ KA + +A + +KF++KD+G AR+ +G I N + R L I Q Y ES+++TF
Sbjct: 273 LKSMGFEPADADPCVYTR-GEGEDECIVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTF 367
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 3.510e-13 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 5 GFEHGKADPCVSRKVVDGEAEVVVVVHVNGILAHAKDKATMDRFEAELGKKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETF 96
G+E + DPCV RKVVDGE ++V++V+ I+ A D+ + A L KKF +KD+G+ +Y GC I + + K+ Q Y+ESM++ F
Sbjct: 383 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIV-AADEGEREELFASLNKKFPVKDVGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 473 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig170553.4362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig170553.4362.1 ID=prot_H-elongata_contig170553.4362.1|Name=mRNA_H-elongata_contig170553.4362.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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