prot_H-elongata_contig17038.4355.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17038.4355.1
Unique Nameprot_H-elongata_contig17038.4355.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length622
Homology
BLAST of mRNA_H-elongata_contig17038.4355.1 vs. uniprot
Match: A0A6H5L5W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W3_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 3.760e-143
Identity = 268/577 (46.45%), Postives = 345/577 (59.79%), Query Frame = 0
Query:   50 LIRQSQRLIEDERDLDVVFDCLHRCEDAEVARQVVDALCDAYRRPKYSSNLPSSCPLPCACTTAGDIVDDVPIKMDIDALKEDPQLHPPSSPVFSIISAAGLYSRVFSLCDGLCCWRTMSPQLRRLIYLNPSAFAGAVIARAAIWGAEDTKGGGENAMSSSSTTTAFHQGSFVGSGFINPWAE--------------------AARMETQRLATRARYTAPPDRGXXXXXXXXXXXXSSRVGTPRVEGGLKRDSWQVVIGETLAGAMPDVARGGMRGVERCCSVADVRSSACSPSPEASCDAAYSPLPLITRALQDAVGGLYAARMIRESFGWIVRGEGDLVETKDSTLEERERRLDQLGCLLWNVGDLRRSLPWHDRERGKS--GTTRLGPSAVNDCGAGPGPVSFVRLVVEELQVQLVRVLDAAASIPIPESPYSSFQMDADYSCEHAGWRSP-VDLEAGMGC-VMCEEVVKPFLINPFACCTSWVPWAGTDGEEFSPAFFQRLGLRFSVEGDAIKAIILTKPRGSPEIHRAMETMRDTLYLRDRAVDIITSANTLAWLLYEREEG----GRPSG 598
            ++ Q  R I DE + D+VF+CLHR ED   A + +DA+C     P+++  LPS  P   A                   L +D  L P +           L+SRVFSL DGL CWR MSPQLRRLI LNPSAFAGAVIARAAI  +    GGG+  +    ++  + +G   G G  +P +                     A++     LA       PP  G            SS        GG+  DSW+ V G+ LA AMP+VARG M+GV  CC+VAD    ACS      CDAAYSPLPL+ RALQD  G + AARM+R++F W+VRGE DL E   +TL ERERRLDQLG L+W++GDLRRSL  H    GKS   T   G     D  +G G  S +R+VVE+++V LV VLD AAS+P+PE P+ S++MD+ Y+CEHAG  +P  + +   GC V C EVVKPFL +P+ C TSWVPWAGTDG++FSP F+QRLGL+ S+EG A+KA++LTKP G+ EIH AM+ +RD LYLRDRA++++TSAN+LAWL ++ EE     G PSG
Sbjct:   12 MVVQPDRWIRDEGEADLVFECLHRSEDPVAACRAIDAICSGVSDPRFALRLPSRRPRSTATAGXXXXXXXXXXXXXXXXLDDDTPLVPVTM----------LFSRVFSLLDGLDCWRLMSPQLRRLISLNPSAFAGAVIARAAIHSSRSGGGGGDGGIDVGGSSPGW-EGRHAGDG--SPLSASSSSXXXXXXXXXXXXCGQPASKRRCFALAGDKMSLNPPAEGKKSRVD------SSSGSAAAAAGGVSADSWRAVAGDVLASAMPEVARGRMQGVRGCCAVAD---RACSSGAVLGCDAAYSPLPLMVRALQDVAGDIAAARMVRDTFSWVVRGERDLEEAPGATLAERERRLDQLGSLVWSLGDLRRSLSLHGEGAGKSEAATGAAGAVVSGDGSSGSGGASLMRVVVEQMEVHLVGVLDTAASMPLPECPFPSYKMDSGYACEHAGCPAPGFERDEDWGCCVTCMEVVKPFLDSPYECWTSWVPWAGTDGDKFSPGFYQRLGLQCSIEGGAVKAVVLTKPHGTMEIHDAMQPIRDALYLRDRALNLLTSANSLAWLHFDGEERLGHCGDPSG 566          
BLAST of mRNA_H-elongata_contig17038.4355.1 vs. uniprot
Match: D7FPL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL7_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 4.920e-137
Identity = 261/572 (45.63%), Postives = 331/572 (57.87%), Query Frame = 0
Query:   43 MKSSVMTLIRQSQRLIEDERDLDVVFDCLHRCEDAEVARQVVDALCDAYRRPKYSSNLPSSCPLPCACTTAGDIVDDVPIKMDIDALKEDPQLHPPSSPVFSIISAAGLYSRVFSLCDGLCCWRTMSPQLRRLIYLNPSAFAGAVIARAAIWGAED--------TKGGGENAMSSSSTTTAFHQGSFVGSGFINPWAEAARMETQRLA-TRARYTAPPDRGXXXXXXXXXXXXSSRVGTPRVEGGLKRDSWQVVIGETLAGAMPDVARGGMRGVERCCSVADVRSSACSPSPEASCDAAYSPLPLITRALQDAVGGLYAARMIRESFGWIVRGEGDLVETKDSTLEERERRLDQLGCLLWNVGDLRRSLPWHDRERGKSGTTRLGPSAVNDCGAGPGP--VSFVRLVVEELQVQLVRVLDAAASIPIPESPYSSFQMDADYSCEHAGWRSPVDLEAGMGCVMCEEVVKPFLINPFACCTSWVPWAGTDGEEFSPAFFQRLGLRFSVEGDAIKAIILTKPRGSPEIHRAMETMRDTLYLRDRAVDIITSANTLAWLLYEREEG----GRPSGG 599
            M + V+ L RQ  R I DE + D+VF+CLHR ED   A + +DA+C     P+++  LPS  P   A                      D            ++    L+SRVFSL DGL CWR MSPQLRRLI LNPSAFAGAVIARAAI  +             GG +   SS            G G +   A A++     LA  +     PP  G            SS +       G+  DSW+ V G+ LA AMP+VARG M+GV  CC+V D    +CS      CDAAYSPLPL+ RALQD  G + AARM+R++F W+VRGE DL E   +TL ERERRLDQLG L+W +GDLRRSL  H    GKS        AV            S +R+VVE+++V LV VLD AAS+P+PE P+ S++MD+ Y+CEHAG  +P        CV C EVVKPFL +P+ C TSWVPWAG DG++FSP F+QRLGL+ S+EG A+KA++LTKP G+  IH AM+ +RD LYLRDRA++++TSAN+LAWL ++ EE     G PSGG
Sbjct:    1 MTADVVALARQPDRWIRDEGEADLVFECLHRSEDPVAACRAIDAICSGMSDPRFALRLPSCRPRSTATGXXXXXXXXXXXXXXXXXXXXDDDT--------PLVPVTMLFSRVFSLLDGLDCWRLMSPQLRRLISLNPSAFAGAVIARAAIHSSRSGXXXXXXXXXXGGIDVGGSSRRD---------GKGGMPATAPASKRPCFALAGDKMTSLNPPAEGKKSGVDS-----SSGLAAAAAAAGVSADSWRAVAGDVLASAMPEVARGRMQGVRGCCAVVD---RSCSSGAVLGCDAAYSPLPLMVRALQDIAGDIAAARMVRDTFSWVVRGERDLEEAPGATLAERERRLDQLGSLVWTLGDLRRSLSLHGEGAGKSEAATGAGGAVXXXXXXXXXXXASLMRVVVEQMEVHLVGVLDTAASMPLPECPFPSYKMDSGYACEHAGCPAPGFERDEECCVTCMEVVKPFLDSPYECWTSWVPWAGIDGDKFSPGFYQRLGLQCSIEGGAVKAVVLTKPHGTMAIHDAMQPVRDALYLRDRALNLLTSANSLAWLHFDAEERLGHCGDPSGG 547          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17038.4355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5W3_9PHAE3.760e-14346.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPL7_ECTSI4.920e-13745.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17038contigH-elongata_contig17038:2260..5030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17038.4355.1mRNA_H-elongata_contig17038.4355.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17038 2260..5832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17038.4355.1 ID=prot_H-elongata_contig17038.4355.1|Name=mRNA_H-elongata_contig17038.4355.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=622bp
MEATSGVHGVLARVRQLLSSLENMLRTSASTVGWAQSEDARAMKSSVMTL
IRQSQRLIEDERDLDVVFDCLHRCEDAEVARQVVDALCDAYRRPKYSSNL
PSSCPLPCACTTAGDIVDDVPIKMDIDALKEDPQLHPPSSPVFSIISAAG
LYSRVFSLCDGLCCWRTMSPQLRRLIYLNPSAFAGAVIARAAIWGAEDTK
GGGENAMSSSSTTTAFHQGSFVGSGFINPWAEAARMETQRLATRARYTAP
PDRGGGGGGGGSSSGGSSRVGTPRVEGGLKRDSWQVVIGETLAGAMPDVA
RGGMRGVERCCSVADVRSSACSPSPEASCDAAYSPLPLITRALQDAVGGL
YAARMIRESFGWIVRGEGDLVETKDSTLEERERRLDQLGCLLWNVGDLRR
SLPWHDRERGKSGTTRLGPSAVNDCGAGPGPVSFVRLVVEELQVQLVRVL
DAAASIPIPESPYSSFQMDADYSCEHAGWRSPVDLEAGMGCVMCEEVVKP
FLINPFACCTSWVPWAGTDGEEFSPAFFQRLGLRFSVEGDAIKAIILTKP
RGSPEIHRAMETMRDTLYLRDRAVDIITSANTLAWLLYEREEGGRPSGGI
GASGGGGGPGGPGGGPSGGAGG
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