prot_H-elongata_contig17017.4345.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17017.4345.1
Unique Nameprot_H-elongata_contig17017.4345.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length452
Homology
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 676 bits (1745), Expect = 2.790e-237
Identity = 357/415 (86.02%), Postives = 380/415 (91.57%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQS-GAGEAGLAGMK 414
            R  VIYKYALDQMPREQVPELYRDFIGFEKRHGSV+GIEEVI+NNRR+QYEE+ASASPLDYDNWFDYLRLEESTGD+DRTREVYERAIANVPPV EKR+WRRYIYLWINYALFEELQAED QRTR VYRACLDVVPH SFTFAK+WL+LAKF VRHKDL AARK+LGQA+GMCPKEKLF GYVQLERDLGEIDRCRK+Y        LEAFPSDCG W +FA LE SVGE ER+RA+FELAIRQPVLDMPETLWK XXXXXXXXXXXXXXXXXX RLLERTQHVKVWI+YAQ+EA+   +LD AR VF RGY+HLR+QGLKEERVKLLEAWRAAEKAEGKGKT GL+EVESKMPRKFKK+RMMTGTNGEGMGWEEYYDYQFPDDE+KPANLKILEMAQKWKQ  GAGE GLAG K
Sbjct:  260 RARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSK-----CLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKXXXXXXXXXXXXXXXXXXXXRLLERTQHVKVWISYAQYEAKA--ELDTARVVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTRGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFK 667          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A835ZA95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA)

HSP 1 Score: 470 bits (1210), Expect = 1.790e-157
Identity = 260/417 (62.35%), Postives = 305/417 (73.14%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARG--VFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWK---QSGAGEAGLAG 412
            R  VIYKYALDQMPR+ VP+LYR+F GFEKR G+  GIE+ ++  RR+QYEE+ +A P  YD WFDY RLEESTGD +R REVYERA+A VPPVA+KR+WRRY++LWINYALFEEL A+D  R R V +ACL VVPH SFTFAK+WL+LA   VR +DL AARK+LG A+G CPK KLF GY+ LE  LGEI+RCR +Y       +L   P DC AWT+FA LE ++GE+ERARA+FELAI QP LDMPE L   XXXXXXXXXXXXXXXXXX    ERTQHVKVW +Y   E              VF RGY  LR+  L+EERV LLEAWR  EKA   G    L+ VE++MPR+ KKKRM+ G  GE +GWEEYYDY+FPDDE  PANLKILEMAQKWK   +  A +AG+ G
Sbjct:  259 RARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVREVYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARARAVLKACLQVVPHESFTFAKIWLMLAHLEVRARDLPAARKVLGNAIGRCPKGKLFKGYIALELQLGEIERCRTLYSR-----YLAWSPGDCAAWTRFAELERTLGEDERARAVFELAIAQPALDMPEALXXXXXXXXXXXXXXXXXXXXXXXXXERTQHVKVWASYGAFEXXXXXXXXXXXXXXVFERGYAALRQMDLREERVILLEAWRDMEKARSGGDAAALRAVEARMPRRLKKKRMLLGDQGEEVGWEEYYDYRFPDDEQAPANLKILEMAQKWKTGLKRKAADAGVDG 670          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A4D9CYM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM6_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 3.280e-154
Identity = 261/450 (58.00%), Postives = 314/450 (69.78%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCP-KEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWK---------------EXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQS-------GAGEAGLAGMKNLWGGGTKRKQGE 427
            R  VIYKYALD +PRE++PELY+ F+ FEK+HG    IE+V+++ RR QYEE  SA PLDYD WFDY RLEE  G++   REVYERAIAN+PPV EKR+WRRYIYLWINYALFEELQA +V+R R VY+ACL V+PH  FTFAK+W+L A   VR KDLGAARK++GQA+G CP KE LF  Y+QLE  LGE++RCR +Y       +LEA+PS C AW   A LE  VGE ER RA+ ELAI QP LDMPE LWK                XXXXXXXXXXXXXXXXXX     RT+HVKVWI+YA +E    G ++ AR VF RGY HL+ Q LKEER+ LLEAWRA EK +G      L  VE+K+P++ KKKRM+ G +G   GWEEYYDY FPDDE +P+ L IL+ AQ WK +       G  + G AG K   G G ++++GE
Sbjct:  221 RSRVIYKYALDNLPREKIPELYQQFVAFEKKHGDRAAIEDVVVSKRRGQYEEALSADPLDYDVWFDYARLEEGQGELSAVREVYERAIANLPPVPEKRFWRRYIYLWINYALFEELQAGEVERAREVYKACLRVIPHKVFTFAKIWVLAAHLEVRCKDLGAARKLMGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAK-----YLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWXXXXXXXXXXXXXXXXXXXXXXXXXXRTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGD--RASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGPQQEGDAGTKE-GGVGKRKREGE 662          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: C3YAA6_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YAA6_BRAFL)

HSP 1 Score: 434 bits (1116), Expect = 7.880e-144
Identity = 218/404 (53.96%), Postives = 281/404 (69.55%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARG--VFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 402
            R  VIYKYALD++P+++  +L++ +   EK++G   GIE VI++ R+ QYEE+  A+P +YD WFDYLRL ES G +D+  EVYERAIANVPP  EKR+WRRYIYLWINYAL+EEL+A+D++RTR VY+ACL+V+PH  FTFAK+WLL A+F +R K+L  AR++LG A+G CPK+KLF GY++LE  L E DRCR +Y     + FLE  P +C +W KFA LE  +G+ ERARAI+ELAI QP LDMPE LWK                    RLLERTQHVKVWI+YA+ E   AGD  AAR   +F +G   LR    KEER+ LLEAWR  E  E  G    L++V   MP++ KK+R +   +G   GWEEYYDY FP+DE+   NLK+L MA++WK+
Sbjct:  218 RVRVIYKYALDRIPKQEAQDLFKSYTIHEKKYGDRAGIENVIVSKRKFQYEEEVKANPNNYDAWFDYLRLLESDGTVDQVHEVYERAIANVPPTPEKRFWRRYIYLWINYALYEELEAKDMERTRMVYKACLEVIPHKKFTFAKIWLLCAQFEIRQKNLAGARRVLGNAIGRCPKDKLFKGYIELELQLREFDRCRILY-----EKFLEFGPENCTSWIKFAELETILGDVERARAIYELAISQPKLDMPEMLWKSYIDFEIEQEEPQRVRELYGRLLERTQHVKVWISYAKFELSVAGDDMAARARKIFEQGNRSLRSCEEKEERLMLLEAWRDVE--EEAGTAESLEKVNKLMPKRVKKRRKVQTEDGMDAGWEEYYDYIFPEDEANQPNLKLLAMAKRWKE 614          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A7S2BXM5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BXM5_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 8.970e-143
Identity = 220/409 (53.79%), Postives = 276/409 (67.48%), Query Frame = 0
Query:   10 LDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCP---KEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWK-----EXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQSGAGEAGL 410
            LD + R+++PELY++FI FEK+ G   GIEEVI+  RR+QYEE  +A   DYD WFDY+RLE++ GD+DRTR+V+ERAIA VPPV EKR+WRRY+Y+WI+YALFEEL A+D+ +TR VY+A L V+PH+ F+FAK+W++ A F VR KDL AARK++GQA+G C    KEK F  Y+ LER LGE+DRCR +Y       +LE  P++C AW  FA              IFELA+ Q  LDMPE LWK     E                  ERLL+RT+HVKVWI+YA  EA   G +D  R V  + Y  L+ +GLK+ERV LLEAWRA EKA+   +   L EV   MPRK KK+RM+TG NGE  GWEEY+DYQFPDD   P NLKILEMA KWK++ A +  L
Sbjct:   97 LDHIGRDKMPELYQEFIQFEKKFGKKDGIEEVILGKRRLQYEEAVAADSHDYDTWFDYIRLEQAEGDLDRTRDVFERAIAQVPPVLEKRFWRRYVYIWIHYALFEELDADDMDKTRAVYQASLQVIPHSHFSFAKLWIMAAHFEVRQKDLQAARKLMGQAIGRCSLLGKEKPFKDYIHLERQLGEVDRCRTLYSK-----YLEVVPTNCAAWGHFAXXXXXXXXXXXXXXIFELAVGQQTLDMPEMLWKQYIDFEINDAKAEESGAGRVRELYERLLDRTKHVKVWISYATFEASEGGGIDDCRSVMRKAYGVLKDEGLKDERVVLLEAWRALEKAQPI-ELQQLTEVSKLMPRKLKKRRMVTGDNGEDTGWEEYFDYQFPDDRVAPMNLKILEMAHKWKENRASKQPL 499          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A8C7PZA1_ONCMY (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7PZA1_ONCMY)

HSP 1 Score: 432 bits (1111), Expect = 2.350e-142
Identity = 217/404 (53.71%), Postives = 278/404 (68.81%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEAR--TAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 402
            R  VIYKYALD++P+ Q  EL++ +  FEK+ G  +GIE+VI++ RR QYEE+  ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PH  FTFAK+WLL  +F +R K+L AAR+ LG A+G CPK KLF GY++LE  L E DRCRK+Y     + +LE  P +C  W KF+ LE  +G+ ERARAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YAQ+E    T+  L   RG+F  G + LR    KEER+ LLE+W+  E+  G   T   + V+  +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:  226 RVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY-----EKYLEFAPENCTTWIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRGLYQRLLQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEGNKGLRSCEEKEERLMLLESWKEFEQEFGSDTTR--ERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 622          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A6P5AGK2_BRABE (crooked neck-like protein 1 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AGK2_BRABE)

HSP 1 Score: 434 bits (1116), Expect = 1.850e-141
Identity = 218/404 (53.96%), Postives = 281/404 (69.55%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGDLDAARG--VFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 402
            R  VIYKYALD++P+++  +L++ +   EK++G   GIE VI++ R+ QYEE+  A+P +YD WFDYLRL ES G +D+ REVYERAIANVPP  EKR+WRRYIYLWINY L+EEL+A+D++RTR VY+ACL+V+PH  FTFAK+WLL A+F VR K+L  AR++LG A+G CPK+KLF GY++LE  L E DRCR +Y     + FLE  P +C +W KFA LE  +G+ ERARAI+ELAI QP LDMPE LWK                    RLLERTQHVKVWI+YA+ E   AG+  AAR   +F +G   LR    KEER+ LLEAWR  E  E  G    L++V   MP++ KK+R +   +G   GWEEYYDY FP+DE+   NLK+L MA++WK+
Sbjct:  273 RVRVIYKYALDRIPKQEAQDLFKSYTIHEKKYGDRAGIENVIVSKRKFQYEEEVKANPNNYDAWFDYLRLLESDGTVDQVREVYERAIANVPPTPEKRFWRRYIYLWINYGLYEELEAKDMERTRMVYKACLEVIPHKKFTFAKIWLLCAQFEVRQKNLAGARRVLGNAIGRCPKDKLFKGYIELELQLREFDRCRILY-----EKFLEFGPENCTSWIKFAELETILGDVERARAIYELAISQPKLDMPEMLWKSYIDFEIEQEEPQRVRELYSRLLERTQHVKVWISYAKFELSVAGEDMAARARKIFEQGNRALRNCEEKEERLMLLEAWRDVE--EEAGSVESLEKVNKLMPKRVKKRRKVQTEDGMDAGWEEYYDYIFPEDEANQPNLKLLAMAKRWKE 669          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A3B3IGK4_ORYLA (Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Oryzias TaxID=8089 RepID=A0A3B3IGK4_ORYLA)

HSP 1 Score: 431 bits (1108), Expect = 2.850e-141
Identity = 217/404 (53.71%), Postives = 277/404 (68.56%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGD--LDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 402
            R  VIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VIIN RR QYEE+  A+PL+YD WFDYLRL ES GD D  R+VYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PH  FTFAK+WLL A+F +R K+L AARKI+G A+G CPK KL  GY++LE  L E DRCRK+Y     + +LE  P +C  W KFA LE  +G+ ER+RAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YA+ E    G   L   R +F    + +R    KEER+ LLE+WR  EK  G   +   + V   +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:  269 RVRVIYKYALDKIPKNQAQELFKNYTMFEKKFGDRRGIEDVIINKRRFQYEEEVKANPLNYDAWFDYLRLVESDGDPDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLMPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLY-----EKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFENTRNLYKRLLQRTQHVKVWISYAKFELSVDGPDRLAKCRQIFEEANKSMRNCEEKEERLMLLESWRDYEKEFGSDSSR--ERVSKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 665          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A4W5MS29_9TELE (Crooked neck pre-mRNA splicing factor 1 n=14 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A4W5MS29_9TELE)

HSP 1 Score: 430 bits (1105), Expect = 2.890e-141
Identity = 216/404 (53.47%), Postives = 277/404 (68.56%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEAR--TAGDLDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 402
            R  VIYKYALD++P+ Q  EL++ +  FEK+ G  +GIE+VI++ RR QYEE+  ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PH  FTFAK+WLL  +F +R K+L AAR+ LG A+G CPK KLF GY++LE  L E DRCRK+Y     + +LE  P +C  W KF+ LE  +G+ ERARAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YAQ+E    T+  L   RG+F    + LR    KEER+ LLE+W+  E+  G   T   + V+  +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:  279 RVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY-----EKYLEFAPENCTTWIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYQRLLQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEANKGLRSCEEKEERLMLLESWKEFEQEFGSDTTR--ERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKR 675          
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Match: A0A3N0Z386_ANAGA (Crooked neck-like protein 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0Z386_ANAGA)

HSP 1 Score: 422 bits (1084), Expect = 2.510e-140
Identity = 213/404 (52.72%), Postives = 271/404 (67.08%), Query Frame = 0
Query:    1 RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQYEEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYWRRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLAKFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYRHGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMPETLWKEXXXXXXXXXXXXXXXXXXERLLERTQHVKVWITYAQHEARTAGD--LDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVESKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKWKQ 402
            R  VIYKYALD++P++Q  EL++++  FEKR G  +GIE+VI++ RR QYEE+  ASP +YD WFDYLRL ES  D D  REVYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACL+V+PH  FTFAK+WLL  +F +R K+L  AR+ LG A+G CPK KLF GY++LE  L E DRCRK+Y     + +LE  P +C  W KFA LE  +G+ ERARAIFELAI QP LDMPE LWK                   +RLL+RTQHVKVWI+YAQ E     D  +   R ++    + +     KEER+ LLE+WR  E  E  G       V   +P K KK+R +T  +G   GWEEYYDY FP+D +   NLK+L MA+ WK+
Sbjct:   61 RVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADADTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLEVIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLY-----EKYLEFSPENCTTWIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWISYAQFEMSIDSDDRIQRCRQIYEEANKSMHGCEEKEERLMLLESWREFE--EEFGSFANKDRVRKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKK 457          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17017.4345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC4_ECTSI2.790e-23786.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZA95_9STRA1.790e-15762.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CYM6_9STRA3.280e-15458.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
C3YAA6_BRAFL7.880e-14453.96Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A7S2BXM5_9STRA8.970e-14353.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8C7PZA1_ONCMY2.350e-14253.71Crooked neck pre-mRNA splicing factor 1 n=1 Tax=On... [more]
A0A6P5AGK2_BRABE1.850e-14153.96crooked neck-like protein 1 n=3 Tax=Branchiostoma ... [more]
A0A3B3IGK4_ORYLA2.850e-14153.71Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Or... [more]
A0A4W5MS29_9TELE2.890e-14153.47Crooked neck pre-mRNA splicing factor 1 n=14 Tax=E... [more]
A0A3N0Z386_ANAGA2.510e-14052.72Crooked neck-like protein 1 n=1 Tax=Anabarilius gr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 5..31
e-value: 780.0
score: 1.5
coord: 265..296
e-value: 4.8E-4
score: 29.5
coord: 190..227
e-value: 73.0
score: 9.1
coord: 119..155
e-value: 0.31
score: 20.1
coord: 229..263
e-value: 1.5E-4
score: 31.2
coord: 157..188
e-value: 7.2
score: 15.6
coord: 75..109
e-value: 3.8E-6
score: 36.4
IPR008847Suppressor of forkedPFAMPF05843Sufcoord: 219..306
e-value: 1.7E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 17..246
e-value: 8.8E-45
score: 155.2
coord: 247..359
e-value: 8.8E-14
score: 53.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..335
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 4..406
NoneNo IPR availablePANTHERPTHR11246:SF3CROOKED NECK-LIKE PROTEIN 1coord: 4..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17017contigH-elongata_contig17017:362..6437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17017.4345.1mRNA_H-elongata_contig17017.4345.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17017 362..6437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17017.4345.1 ID=prot_H-elongata_contig17017.4345.1|Name=mRNA_H-elongata_contig17017.4345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=452bp
RPSVIYKYALDQMPREQVPELYRDFIGFEKRHGSVKGIEEVIINNRRMQY
EEQASASPLDYDNWFDYLRLEESTGDIDRTREVYERAIANVPPVAEKRYW
RRYIYLWINYALFEELQAEDVQRTRRVYRACLDVVPHTSFTFAKVWLLLA
KFHVRHKDLGAARKILGQALGMCPKEKLFIGYVQLERDLGEIDRCRKIYR
HGSRQGFLEAFPSDCGAWTKFATLEASVGENERARAIFELAIRQPVLDMP
ETLWKEYIDFEADNDETQRARDLFERLLERTQHVKVWITYAQHEARTAGD
LDAARGVFGRGYEHLRKQGLKEERVKLLEAWRAAEKAEGKGKTTGLQEVE
SKMPRKFKKKRMMTGTNGEGMGWEEYYDYQFPDDESKPANLKILEMAQKW
KQSGAGEAGLAGMKNLWGGGTKRKQGELEGSPKALAANEEGDDEEIYLDD
EE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR008847Suf
IPR011990TPR-like_helical_dom_sf