prot_H-elongata_contig169823.4333.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig169823.4333.1
Unique Nameprot_H-elongata_contig169823.4333.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: D7G1I0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I0_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 4.090e-57
Identity = 99/102 (97.06%), Postives = 99/102 (97.06%), Query Frame = 0
Query:    1 MVSAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQA 102
            MVSAENVREQLGRLM RLELRMVSTEFT RDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVW MFEEFVLTSKNYIRTVTGVQA
Sbjct:  570 MVSAENVREQLGRLMGRLELRMVSTEFTARDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQA 671          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A6H5L043_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L043_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 4.400e-49
Identity = 87/91 (95.60%), Postives = 87/91 (95.60%), Query Frame = 0
Query:   12 GRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQA 102
             RLM RLELRMVSTEFT RDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVW MFEEFVLTSKNYIRTVTGVQA
Sbjct:  591 SRLMGRLELRMVSTEFTARDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQA 681          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A836CBU4_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU4_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.510e-44
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0
Query:    1 MVSAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            M SA+NVREQL RLM RL L + STEFT+RDYYTNIKKAL AGMFMQVAH ERS HYLTVKDNQ+V IHPSS LD+KP W +FEEFVLTSKN+IRTVT VQ
Sbjct:  572 MGSADNVREQLSRLMQRLNLPLKSTEFTNRDYYTNIKKALCAGMFMQVAHRERSDHYLTVKDNQIVGIHPSSALDSKPEWVIFEEFVLTSKNFIRTVTAVQ 672          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A183QYA0_9TREM (OB_NTP_bind domain-containing protein n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183QYA0_9TREM)

HSP 1 Score: 147 bits (372), Expect = 2.910e-43
Identity = 69/99 (69.70%), Postives = 83/99 (83.84%), Query Frame = 0
Query:    3 SAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            SA+NVR QL R+M R  LR  ST+FT RDYY NI+KAL +G FMQVAHLER+GHYLTVKDNQVV +HPS+V+D+KP W ++ EFVLT+KNYIRTVT V+
Sbjct:   24 SADNVRVQLSRIMDRFSLRRSSTDFTSRDYYINIRKALVSGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVMDHKPEWVLYNEFVLTTKNYIRTVTEVK 122          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A0M3KHY3_ANISI (OB_NTP_bind domain-containing protein n=2 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3KHY3_ANISI)

HSP 1 Score: 146 bits (369), Expect = 5.980e-43
Identity = 67/100 (67.00%), Postives = 85/100 (85.00%), Query Frame = 0
Query:    3 SAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQA 102
            +A+NVR QL R+M +  L+ VST+F  +DYY NI+KAL +G FMQVAHLERSGHY+TVKDNQ+V +HPS+VLD+KP WA++ EFVLT+KNYIRTVT V+A
Sbjct:   25 NADNVRTQLARIMDKYNLKRVSTDFKSKDYYINIRKALVSGFFMQVAHLERSGHYITVKDNQLVQLHPSTVLDHKPEWALYNEFVLTTKNYIRTVTDVKA 124          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A2H2HWB8_CAEJA (OB_NTP_bind domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2HWB8_CAEJA)

HSP 1 Score: 145 bits (366), Expect = 8.490e-43
Identity = 68/101 (67.33%), Postives = 85/101 (84.16%), Query Frame = 0
Query:    1 MVSAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            M +A+ VR QL R+M +  LR VST+F  RDYY NI+KAL AG FMQVAHLERSGHY+TVKDNQ+V++HPS+VLD+KP WA++ EFVLT+KN+IRTVT V+
Sbjct:    1 MKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVR 101          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: UPI00096B1D29 (pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B1D29)

HSP 1 Score: 149 bits (375), Expect = 1.600e-42
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 0
Query:    3 SAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            SA+NVR+QL R+M R  L+  ST+F+ +DYYTNI+KAL AG FMQVAHLERSGHYLTVKDNQVV +HPS+ LD+KP W ++ EFVLTSKNYIRT T ++
Sbjct:  134 SADNVRDQLSRIMDRFNLKRTSTDFSSKDYYTNIRKALVAGFFMQVAHLERSGHYLTVKDNQVVQLHPSTCLDHKPEWVLYNEFVLTSKNYIRTCTDIK 232          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A1A9V383_GLOAU (OB_NTP_bind domain-containing protein n=4 Tax=Glossina TaxID=7393 RepID=A0A1A9V383_GLOAU)

HSP 1 Score: 146 bits (369), Expect = 1.890e-42
Identity = 67/99 (67.68%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    3 SAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            SA+NVREQL R+M R  L+  STEFT +DYY NI+KAL  G FMQVAHLER+GHYLT+KDNQ+V +HPS+ LD+KP W ++ EFVLT+KNYIRTVT V+
Sbjct:   64 SADNVREQLARIMDRFNLKRSSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQIVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVK 162          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A2D4LTP4_9SAUR (OB_NTP_bind domain-containing protein n=2 Tax=Amniota TaxID=32524 RepID=A0A2D4LTP4_9SAUR)

HSP 1 Score: 145 bits (366), Expect = 2.110e-42
Identity = 67/101 (66.34%), Postives = 83/101 (82.18%), Query Frame = 0
Query:    1 MVSAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            ++SA+NVR+QL R+M R  L   ST+FT RDYY NI+KAL  G FMQVAHLER+GHYLTVKDNQVV +HPS+VLD+KP W ++ EFVLT+KNYIRT T ++
Sbjct:   31 LMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIK 131          
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Match: A0A7S2SQY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY7_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.460e-42
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    3 SAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGVQ 101
            SA++VR QL R+M RLEL +VST+F+ RDYY NI+K L  GMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLD KP W +FEEFVLTSKN++RTVT V+
Sbjct:  589 SADSVRNQLKRIMERLELPLVSTDFSSRDYYINIRKCLVEGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDQKPPWVLFEEFVLTSKNFVRTVTAVR 687          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169823.4333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1I0_ECTSI4.090e-5797.06RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L043_9PHAE4.400e-4995.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBU4_9STRA3.510e-4479.21RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A183QYA0_9TREM2.910e-4369.70OB_NTP_bind domain-containing protein n=2 Tax=Schi... [more]
A0A0M3KHY3_ANISI5.980e-4367.00OB_NTP_bind domain-containing protein n=2 Tax=Anis... [more]
A0A2H2HWB8_CAEJA8.490e-4367.33OB_NTP_bind domain-containing protein n=1 Tax=Caen... [more]
UPI00096B1D291.600e-4268.69pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A1A9V383_GLOAU1.890e-4267.68OB_NTP_bind domain-containing protein n=4 Tax=Glos... [more]
A0A2D4LTP4_9SAUR2.110e-4266.34OB_NTP_bind domain-containing protein n=2 Tax=Amni... [more]
A0A7S2SQY7_9STRA2.460e-4275.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 36..101
e-value: 2.5E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 2..101
NoneNo IPR availablePANTHERPTHR18934:SF95PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX15coord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig169823contigH-elongata_contig169823:97..891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig169823.4333.1mRNA_H-elongata_contig169823.4333.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig169823 97..897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig169823.4333.1 ID=prot_H-elongata_contig169823.4333.1|Name=mRNA_H-elongata_contig169823.4333.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MVSAENVREQLGRLMSRLELRMVSTEFTDRDYYTNIKKALTAGMFMQVAH
LERSGHYLTVKDNQVVSIHPSSVLDNKPVWAMFEEFVLTSKNYIRTVTGV
QA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011709DUF1605