prot_H-elongata_contig169702.4325.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig169702.4325.1
Unique Nameprot_H-elongata_contig169702.4325.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
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BLAST of mRNA_H-elongata_contig169702.4325.1 vs. uniprot
Match: A0A6H5L5K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K1_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.090e-26
Identity = 46/58 (79.31%), Postives = 50/58 (86.21%), Query Frame = 0 
Query:    1 QVNHGWLRRDPSKHPYLPRRCSRVILPAPGGEFIDGCAKGRSCPAAHSLEEILYHPQV 58
            QVNHGWLRRDPSKHPYLPR C R+ILP PGGE++D C +GRSCP AHSLEEI YH QV
Sbjct:   25 QVNHGWLRRDPSKHPYLPRLCERIILPGPGGEYLDDCTRGRSCPNAHSLEEIQYHHQV 82
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BLAST of mRNA_H-elongata_contig169702.4325.1 vs. uniprot
Match: D8LE11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE11_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.020e-26
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0 
Query:    1 QVNHGWLRRDPSKHPYLPRRCSRVILPAPGGEFIDGCAKGRSCPAAHSLEEILYHPQ 57
            +VNHGWLRRDPSKHPYLPR C RVILP PGGE++D CA+GRSCP AHSLEEI YH Q
Sbjct:  572 EVNHGWLRRDPSKHPYLPRLCERVILPGPGGEYLDDCARGRSCPNAHSLEEIQYHHQ 628
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169702.4325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5K1_9PHAE1.090e-2679.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE11_ECTSI2.020e-2680.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig169702contigH-elongata_contig169702:1142..1339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig169702.4325.1mRNA_H-elongata_contig169702.4325.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig169702 1142..1339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig169702.4325.1 ID=prot_H-elongata_contig169702.4325.1|Name=mRNA_H-elongata_contig169702.4325.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
QVNHGWLRRDPSKHPYLPRRCSRVILPAPGGEFIDGCAKGRSCPAAHSLE
EILYHPQVTMYLLFG*
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