prot_H-elongata_contig16968.4324.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16968.4324.1
Unique Nameprot_H-elongata_contig16968.4324.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: D8LLL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL1_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 2.190e-103
Identity = 161/216 (74.54%), Postives = 191/216 (88.43%), Query Frame = 0
Query:    1 MNSPAAKRQRQVDHNESIRNINVVKIGLSIMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANP-DDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKATGERIVYIKGNLDQREKALDIIRNNPKVT 215
            M  PAAKR+R V+H+ES+RNI VVK GLSIMCPSD+MGMLIGKGGSGLRE+Q  +GVKVSLQETKS+PEGAKERGVGLSG+L+CV+NVE++IF+KLNARRVT+LAPSPAEEEFE AY+ AKAAG++PNG  D +  +DP++ITVVRWIM N  CGWLIGKGGSGIQNIE+TSGAQVRVA+E+S  K + ERIVY+KGN  QRE AL++IR NPK+T
Sbjct:   72 MTPPAAKRRRSVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKSQREAALELIRTNPKIT 287          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A0A6H5KI98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI98_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 7.450e-102
Identity = 161/216 (74.54%), Postives = 191/216 (88.43%), Query Frame = 0
Query:    1 MNSPAAKRQRQVDHNESIRNINVVKIGLSIMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANP-DDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKATGERIVYIKGNLDQREKALDIIRNNPKVT 215
            M  PAAKR+R V+H+ES+RNI VVK GLSIMCPSD+MGMLIGKGGSGLRE+Q  +GVKVSLQETKS+PEGAKERGVGLSG+L+CV+NVE++IF+KLNARRVT+LAPSPAEEEFE AY+ AKAAG++PNG+ D    +DP++ITVVRWIM N  CGWLIGKGGSGIQNIE+TSGAQVRVA+E+S  K + ERIVY+KGN  QRE AL++IR NPK+T
Sbjct:    1 MTPPAAKRRRSVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGMEPNGIADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKIT 216          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A0A7S3XK83_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK83_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 2.750e-15
Identity = 54/183 (29.51%), Postives = 96/183 (52.46%), Query Frame = 0
Query:   28 LSIMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKATGERIVYIKGNLDQREKALDIIRN 210
            ++++ P + +G +IGKGGS +R+LQ ++   V LQE  ++PEGA ERGV LSG ++ + + +R I   ++  R                            GLE    D+    T  +W++ + + G +IGK G+GI+ ++  +GA + VA+     K T +R+V ++G+    EKA  ++ +
Sbjct:    7 ITLLFPIEGIGTIIGKGGSTIRQLQRDAECNVRLQEPSTVPEGAAERGVTLSGPVDHMLDAQRRILAVIDQER---------------------------RGLEGQAEDEGDEKTH-KWLIPDHRAGLVIGKRGAGIEELKKKTGAHIWVAAVYEMPKGTEDRLVTVRGDEAACEKARKMLED 161          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A9RYT2_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RYT2_PHYPA)

HSP 1 Score: 68.9 bits (167), Expect = 4.530e-10
Identity = 51/188 (27.13%), Postives = 92/188 (48.94%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETK----------SMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKAT--GERIVYIKGNLDQREKAL 205
            I+CP+  +G +IGKGGS ++ L+  SG K+ + +            S  +   +RG G  G  E ++  +  +F K++AR +                 + + +G+D +  E    ++PS+  V R ++ N Q G L+GKGG  I+ +  T+GAQ+RV  +          + +V + G++   +KAL
Sbjct:    7 ILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDRGRGKDGNSEELTPAQEALF-KVHARIIA----------------DVETSGIDGSDQE----EEPSQQVVTRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKAL 173          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A2YQJ6_ORYSI (Uncharacterized protein n=11 Tax=Oryza TaxID=4527 RepID=A2YQJ6_ORYSI)

HSP 1 Score: 68.9 bits (167), Expect = 5.500e-10
Identity = 55/189 (29.10%), Postives = 83/189 (43.92%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKAT-GERIVYIKGNLDQREKALDIIRNNPKVTLG 217
            I  P++ +G+LIGK G  +R LQ NSG K+ + +       A  R V L G LE +   ER+I                     +N   EA A G  P  +        S       ++ + + G +IGKGG  I+ +++ SGA++++  +      T  ER V I GN  Q E A D+I+     T  
Sbjct:  156 INVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAERLI---------------------KNVIAEADAGGS-PALIARGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEAAKDMIKQAMSQTFS 322          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: R0HAL4_9BRAS (Uncharacterized protein n=1 Tax=Capsella rubella TaxID=81985 RepID=R0HAL4_9BRAS)

HSP 1 Score: 68.9 bits (167), Expect = 5.640e-10
Identity = 51/181 (28.18%), Postives = 87/181 (48.07%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKATGERIVYIKGNLDQREKALDIIRN 210
            I  PS  +G+LIGKGG  +R LQ NSG K+ +         +  R V + G + C+ N E++I   +          S AE    +A       G    G+       P +I +    + N + G +IG+GG  I+N+++ SGA++++  + +      ER V I G+  Q + A ++I++
Sbjct:  208 IEVPSSKVGVLIGKGGETIRNLQFNSGAKIQILRDSEADPNSSVRPVDIIGTVVCIENAEKLINAVI----------SEAEAGGSSALVARGHPGTHAIGI-------PEQIEIK---VPNDKVGQIIGRGGETIKNMQTRSGARIQLIPQHAEGDGVKERTVRISGDKRQIDIATNMIKD 368          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A0A0P0XB22_ORYSJ (Os08g0110800 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0XB22_ORYSJ)

HSP 1 Score: 68.2 bits (165), Expect = 5.850e-10
Identity = 54/181 (29.83%), Postives = 82/181 (45.30%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKAT-GERIVYIKGNLDQREKALDIIR 209
            I  P++ +G+LIGK G  +R LQ NSG K+ + +       A  R V L G LE +   ER+I                     +N   EA A G  P  +        S       ++ + + G +IGKGG  I+ +++ SGA++++  +      T  ER V I GN  Q E A D+I+
Sbjct:  156 INVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAERLI---------------------KNVIAEADAGGS-PALIARGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEAAKDMIK 314          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A0A1U8F2H4_CAPAN (KH domain-containing protein At4g18375 n=5 Tax=Capsicum TaxID=4071 RepID=A0A1U8F2H4_CAPAN)

HSP 1 Score: 68.2 bits (165), Expect = 9.720e-10
Identity = 56/194 (28.87%), Postives = 93/194 (47.94%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDK-LNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKAT--GERIVYIKGNLDQREKAL----DIIRNNPKVTL 216
            I+CP+D  G LIGKGG+ +R+++  +G K+ + ++ S   G  ER + +     C  NVE ++ D+ L+     + A       FE   +  +    +  G +D N        V R +  + Q G ++G+GG  I+ I   SGAQVRV S          G+ ++ I G L    KAL      +++N ++ L
Sbjct:   56 ILCPADKTGGLIGKGGATIRQVREETGAKIRIDDSLS---GCDERVIVIIA--NC--NVEEVVNDEELSLSMSASQAQRALIRVFERILKVDEEGNAEGEGRKDIN-------VVCRLLAPSYQVGCVLGRGGKVIEKIRLESGAQVRVLSNDQIPPCASPGDELIQIAGTLSTVRKALLSVSSCLQDNSRIDL 235          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A0A1Y1HSU6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSU6_KLENI)

HSP 1 Score: 67.0 bits (162), Expect = 2.180e-9
Identity = 47/180 (26.11%), Postives = 83/180 (46.11%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKATGERIVYIKGNLDQREKALDIIR 209
            +  P+  +G++IGKGG  +++LQ  S  ++ +   +  P GA+ R + + G  E ++  E++I D +N                          G     L    PD       V  I+ N + G +IGKGG  I+N+++ SGA+++V S+ +      ER V + GN     +A  +I+
Sbjct:  147 VQIPNAKVGLVIGKGGETIKQLQYQSQARIQVTRDQDTPPGAQYREIEVVGTDEAIAKAEQLINDIVND------------------------VGGPGRALAAPGPD------AVTMIVPNDKVGLIIGKGGETIKNLQNRSGARIQVQSDATLEPGATERTVTLSGNGQATAEAKRLIQ 296          
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Match: A0A443P1U0_9MAGN (Far upstream element-binding protein 2-like protein isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443P1U0_9MAGN)

HSP 1 Score: 67.0 bits (162), Expect = 2.600e-9
Identity = 53/184 (28.80%), Postives = 88/184 (47.83%), Query Frame = 0
Query:   30 IMCPSDSMGMLIGKGGSGLRELQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKL---NARRVTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSNTQCGWLIGKGGSGIQNIESTSGAQVRVASEK-STSKATGERIVYIKGNLDQREKALDIIR 209
            I  P++ + +LIGK G  ++ LQ NSG ++ +     +   +  R V L G LE ++  E++I D +   +AR   AL               A+  G    G E            ++  +   + GW+IGKGG  I+N+++ SGA+++V  +      A+ ER V I GN  Q E A ++I+
Sbjct:  191 IEIPNNKVAVLIGKAGDTIKFLQYNSGTRIQITRDADVDPNSSTRPVELIGKLENINKAEQLIKDVIAEADARGSPALV--------------ARGFGTAQTGAEQ-----------IQMKVPYEKVGWIIGKGGETIKNLQARSGARIQVILQNIPEGDASNERTVRITGNKQQIETAREMIK 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16968.4324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLL1_ECTSI2.190e-10374.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI98_9PHAE7.450e-10274.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XK83_HETAK2.750e-1529.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A9RYT2_PHYPA4.530e-1027.13Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A2YQJ6_ORYSI5.500e-1029.10Uncharacterized protein n=11 Tax=Oryza TaxID=4527 ... [more]
R0HAL4_9BRAS5.640e-1028.18Uncharacterized protein n=1 Tax=Capsella rubella T... [more]
A0A0P0XB22_ORYSJ5.850e-1029.83Os08g0110800 protein n=1 Tax=Oryza sativa subsp. j... [more]
A0A1U8F2H4_CAPAN9.720e-1028.87KH domain-containing protein At4g18375 n=5 Tax=Cap... [more]
A0A1Y1HSU6_KLENI2.180e-926.11Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A443P1U0_9MAGN2.600e-928.80Far upstream element-binding protein 2-like protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 24..97
e-value: 5.1E-8
score: 42.7
coord: 135..213
e-value: 7.8E-6
score: 35.4
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 29..92
e-value: 2.9E-9
score: 36.6
coord: 147..209
e-value: 3.4E-13
score: 49.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 139..213
e-value: 4.5E-15
score: 57.2
coord: 24..100
e-value: 2.0E-15
score: 58.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 143..210
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 28..98
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 28..111
coord: 141..209
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 141..208
score: 13.46
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 25..92
score: 14.781

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16968contigH-elongata_contig16968:5329..7262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16968.4324.1mRNA_H-elongata_contig16968.4324.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16968 5005..7509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16968.4324.1 ID=prot_H-elongata_contig16968.4324.1|Name=mRNA_H-elongata_contig16968.4324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
MNSPAAKRQRQVDHNESIRNINVVKIGLSIMCPSDSMGMLIGKGGSGLRE
LQNNSGVKVSLQETKSMPEGAKERGVGLSGALECVSNVERIIFDKLNARR
VTALAPSPAEEEFENAYQEAKAAGLDPNGLEDANPDDPSRITVVRWIMSN
TQCGWLIGKGGSGIQNIESTSGAQVRVASEKSTSKATGERIVYIKGNLDQ
REKALDIIRNNPKVTLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf