prot_H-elongata_contig169679.4323.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig169679.4323.1
Unique Nameprot_H-elongata_contig169679.4323.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length229
Homology
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BLAST of mRNA_H-elongata_contig169679.4323.1 vs. uniprot
Match: D8LDA5_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA5_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 2.450e-51
Identity = 142/236 (60.17%), Postives = 157/236 (66.53%), Query Frame = 0 
Query:    1 TTATFSTSVNPNNAAAEATEDLSSLMVDTSXXXXXXXXXXXXXXXXXTVPGTVT-------LDPTTAAGSKVLTSSPLTPKXXXXXXXXXXXXXXXXXXXXXXXXXREQREELGLVEQLTNMVEVFDICDLLRKVSNSNSSRMDKHGGVVKPATGGSSAGGSQLSFHARNMSVDSSP-LPQSPQTARDGQTGLGSLASMELVRDSSKEWDTLMAGSTDVSDLSSTMVQSVAEFFSF 228
            TTA    S  P +++A     +S LMVDTS                   P TVT       +DP+TAAG+K LTSSPLTPK        XXXXXXXXXXXXXXXXX  QREELGLVEQLTNMVEVFDICDLLRKVS S SSR+DKHG ++KP+   S         H RNMSVD+   +PQSP       TGLGSLASMELVRDSSK+WDTLMAGS DVSDL +TMVQSVAEFFSF
Sbjct:  415 TTAGALPSERPASSSAGDDGPISPLMVDTSAEARAAASGASLRGVRPP-PVTVTGGGQRIPIDPSTAAGNKALTSSPLTPKSSLEAAAMXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIMKPS---SXXXXXXXPHHLRNMSVDTDQGMPQSPLGGGQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 646
[Close]
BLAST of mRNA_H-elongata_contig169679.4323.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 4.130e-51
Identity = 124/177 (70.06%), Postives = 136/177 (76.84%), Query Frame = 0 
Query:   53 VTLDPTTAAGSKVLTSSPLTPKXXXXXXXXXXXXXXXXXXXXXXXXXREQREELGLVEQLTNMVEVFDICDLLRKVSNSNSSRMDKHGGVVKPATGGSSAGGSQLSFHARNMSVDSSP-LPQSPQTARDGQTGLGSLASMELVRDSSKEWDTLMAGSTDVSDLSSTMVQSVAEFFSF 228
            + +DP+TAAG+K LTSSPLTPK        XXXXXXXXXXXXXXXXX  QREELGLVEQLTNMVEVFDICDLLRKVS S SSR+DKHG +VKP+          +  H RNMSVD+   +PQ P       TGLGSLASMELVRDSSK+WDTLMAGS DVSDL +TMVQSVAEFFSF
Sbjct:  488 IPIDPSTAAGNKALTSSPLTPKSSLEAAAIXXXXXXXXXXXXXXXXXXXQREELGLVEQLTNMVEVFDICDLLRKVSTSGSSRLDKHGAIVKPS---GXXXXXXVPHHLRNMSVDTDQGMPQPPLEGEQSPTGLGSLASMELVRDSSKDWDTLMAGSADVSDLGNTMVQSVAEFFSF 661
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169679.4323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDA5_ECTSI2.450e-5160.17Putative Heat Shock transcription factor n=1 Tax=E... [more]
A0A6H5KMN3_9PHAE4.130e-5170.06HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig169679contigH-elongata_contig169679:680..1366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig169679.4323.1mRNA_H-elongata_contig169679.4323.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig169679 680..1366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig169679.4323.1 ID=prot_H-elongata_contig169679.4323.1|Name=mRNA_H-elongata_contig169679.4323.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
TTATFSTSVNPNNAAAEATEDLSSLMVDTSAAARAAAAGIAARPPPVTVP
GTVTLDPTTAAGSKVLTSSPLTPKSCATAAASTAAAAAAAAAAMPPPAKR
EQREELGLVEQLTNMVEVFDICDLLRKVSNSNSSRMDKHGGVVKPATGGS
SAGGSQLSFHARNMSVDSSPLPQSPQTARDGQTGLGSLASMELVRDSSKE
WDTLMAGSTDVSDLSSTMVQSVAEFFSF*
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