prot_H-elongata_contig169478.4310.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig169478.4310.1
Unique Nameprot_H-elongata_contig169478.4310.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
BLAST of mRNA_H-elongata_contig169478.4310.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.050e-13
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   37 EKLSSDLNLPEELTSVAVGVNGSVPFRPIFFVDGGELYLEGVTIRGGNATKSTENTIASGGEIYAIASNVSISGCVFEENFAEDYG 122
            ++L S L+LP +  S AV     +   PIFFV+GG+L L  + +R GNAT  +  T+ SGG ++A+ SNV+I+GC+FE NFA   G
Sbjct:  128 DELWSGLSLPRDDLSSAVVAGSGLSDGPIFFVNGGQLSLNALAVRDGNATGDSNATVDSGGGVHAVQSNVTITGCLFENNFARVLG 213          
BLAST of mRNA_H-elongata_contig169478.4310.1 vs. uniprot
Match: D7G167_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G167_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 4.290e-11
Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:   61 PFRPIFFVDGGELYLEGVTIRGGNATKST-------------------------ENTIA----SGGEIYAIASNVSISGCVFEENFAEDYGVGIYANLST 131
            P  P+FFVDGG+L+L+ + +RGG  + ST                         E  IA    SGG ++AI SNV+++GC FEEN+A+ +G GI+AN ST
Sbjct:    3 PTGPLFFVDGGQLFLDSLAVRGGYTSNSTGSFTYAASTDAAADGTNSTTTSGVNETAIATVVISGGGVHAIDSNVTVTGCEFEENYADYWGGGIFANGST 102          
BLAST of mRNA_H-elongata_contig169478.4310.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.010e-10
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 0
Query:   59 SVPFRPIFFVDGGELYLEGVTIRGGNATKST-------------------------ENTIA----SGGEIYAIASNVSISGCVFEENFAEDYGVGIYANLST 131
            + P  P+FFVDGG+L+L+ + +RGG  + ST                         E  IA    SGG ++AI SNV+++GC FEEN+A+ +G GI+AN ST
Sbjct:   41 TAPTGPLFFVDGGQLFLDSLAVRGGYTSNSTGSFTYAASTDAAADGTNSTTTSGVNETAIATVVISGGGVHAIDSNVTVTGCEFEENYADYWGGGIFANGST 142          
BLAST of mRNA_H-elongata_contig169478.4310.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 6.520e-10
Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 0
Query:   59 SVPFRPIFFVDGGELYLEGVTIRGGNATKST-------------------------ENTIA----SGGEIYAIASNVSISGCVFEENFAEDYGVGIYANLST 131
            + P  P+FFVDGG+L+L+ + +RGG  + ST                         E  IA    SGG ++AI SNV+++GC FE N+A+ +G GI+AN ST
Sbjct:  188 TTPTGPLFFVDGGQLFLDSLAVRGGYTSNSTGSFTYTASTDAADDAANSTNTSGVNETAIATVVISGGGVHAIDSNVTVTGCEFEANYADFWGGGIFANGST 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169478.4310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K4A5_9PHAE2.050e-1345.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G167_ECTSI4.290e-1140.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0B0_ECTSI1.010e-1039.22Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JRA9_9PHAE6.520e-1038.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 60..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig169478contigH-elongata_contig169478:705..1097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig169478.4310.1mRNA_H-elongata_contig169478.4310.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig169478 705..1097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig169478.4310.1 ID=prot_H-elongata_contig169478.4310.1|Name=mRNA_H-elongata_contig169478.4310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
ASPVESGSNAGSSASSSSNNSNTNSSTSDVDLDLKLEKLSSDLNLPEELT
SVAVGVNGSVPFRPIFFVDGGELYLEGVTIRGGNATKSTENTIASGGEIY
AIASNVSISGCVFEENFAEDYGVGIYANLST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence