prot_H-elongata_contig16947.4309.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16947.4309.1
Unique Nameprot_H-elongata_contig16947.4309.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length453
Homology
BLAST of mRNA_H-elongata_contig16947.4309.1 vs. uniprot
Match: D7FUF5_ECTSI (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF5_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 4.980e-149
Identity = 270/467 (57.82%), Postives = 322/467 (68.95%), Query Frame = 0
Query:    1 QVLKKNRVGLLMEYAAMYRQLGRTDRFRGEYCRARAGVAHRRWFASATEGGSGEDAGAAGNGLATWLPPFLEYLQGSLMDERKKTSDLFGPDKSPAVLCELVVTAFQPLVGSFQASRASPRAQRKHLEAAPWPDAVGLLTEVLRFVSQSLELSRGAGERDLLAVLLSATAAFRSAQDRRAHFPLLTRSYLSAELQPLLETLRDVPRVLGDGSTAMAMAFTRRMEEISEVSTEGFGVVQQAVGRCIELTAGYQGRDLLKHAAESMSGFLKAVRGATQQSRSLGKGVLIQSTLEEYDGAPSYGDED--GTASDVSAE-----AFAKGRGGDFDWQFLSGALVLLGAAGRCQQCFATLEKEIATVLLRHRGALFSSSPPRLSGLVLPPNASISSSGIFGKGVGTLGTAAASGISVGVDGGS-------EEERVAFLRSVLGRARLEEDRATRAETRASLMVIADPSSALP 453
            +++KK+R+G LMEYAAMYRQLGRTD FR EYC  +A  AH+RWFASAT   SG + G   +GLA WLP FLEYLQGSLMDERKKTSDLFG D SPAVLC+LVV AFQPL+GSFQ          KHLEAAPW +AV LLTEVLRFV+Q+++L RGA ERDLLAVLLS+T+ FR  QD    F    RS+LS ELQPLLETL  V   +  G TA AM FTRRMEEIS+VST+GF VVQQ+ GRC ELT GYQGRDLL+ AAE++S FLKAVR A +QSRS G               P+ G ++  G A+ V  +         G  GDFDWQ+L GALVLLGAAGRCQ+CFA +E+E A+ LLR R  LF+SS PRLS L +P N+ + ++   G+G GT+    A+                 EE RVA LRS+L R RL+EDR  RAETRASLM + +PS+A+P
Sbjct:  221 EIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATS--SGSEGGTTSSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQ----------KHLEAAPWTEAVALLTEVLRFVNQAVDLLRGASERDLLAVLLSSTSGFRLIQDS---FGAHERSFLSLELQPLLETLGGVTSAVERGGTAPAMTFTRRMEEISDVSTKGFVVVQQSAGRCTELTGGYQGRDLLREAAEALSAFLKAVRDAARQSRSFGN-------------QPATGRDEVLGVAAGVEEQENYLDGGLGGGNGDFDWQYLQGALVLLGAAGRCQRCFAGVEEEFASALLRDRIGLFASSAPRLSSLAMPANSPLPNTN-GGRGAGTVPENGAAXXXXXXXXXXXXXXXXXEEGRVAVLRSLLARVRLDEDRTARAETRASLMALVEPSAAVP 658          
BLAST of mRNA_H-elongata_contig16947.4309.1 vs. uniprot
Match: A0A7S3M3G0_9STRA (Conserved oligomeric Golgi complex subunit 7 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3G0_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.490e-5
Identity = 36/103 (34.95%), Postives = 48/103 (46.60%), Query Frame = 0
Query:   11 LMEYAAMYRQLGRTDRFRGEYCRARAGVAHRRWFASATEGGSGEDAGAAGNGLATWLPPFLEYLQGSLMDERKKTSDLFGPDKSPAVLCELVVTAFQPLVGSF 113
            L EY  ++++LGR      EY +AR       W    TE  S     A       WL  FL  +   L DE   T  LFG DKSP+VLC++++ A +PL    
Sbjct:  189 LQEYLYVFKKLGREHELEEEYVKARPDRIKSVW----TEYNS-----AKHPDFPKWLATFLGKVARLLADEETSTVTLFGADKSPSVLCDILIEALRPLTAGL 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16947.4309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUF5_ECTSI4.980e-14957.82Conserved oligomeric Golgi complex subunit 7 n=2 T... [more]
A0A7S3M3G0_9STRA7.490e-534.95Conserved oligomeric Golgi complex subunit 7 (Frag... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019335Conserved oligomeric Golgi complex subunit 7PFAMPF10191COG7coord: 2..366
e-value: 8.7E-9
score: 34.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16947contigH-elongata_contig16947:923..7368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16947.4309.1mRNA_H-elongata_contig16947.4309.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16947 923..7368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16947.4309.1 ID=prot_H-elongata_contig16947.4309.1|Name=mRNA_H-elongata_contig16947.4309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=453bp
QVLKKNRVGLLMEYAAMYRQLGRTDRFRGEYCRARAGVAHRRWFASATEG
GSGEDAGAAGNGLATWLPPFLEYLQGSLMDERKKTSDLFGPDKSPAVLCE
LVVTAFQPLVGSFQASRASPRAQRKHLEAAPWPDAVGLLTEVLRFVSQSL
ELSRGAGERDLLAVLLSATAAFRSAQDRRAHFPLLTRSYLSAELQPLLET
LRDVPRVLGDGSTAMAMAFTRRMEEISEVSTEGFGVVQQAVGRCIELTAG
YQGRDLLKHAAESMSGFLKAVRGATQQSRSLGKGVLIQSTLEEYDGAPSY
GDEDGTASDVSAEAFAKGRGGDFDWQFLSGALVLLGAAGRCQQCFATLEK
EIATVLLRHRGALFSSSPPRLSGLVLPPNASISSSGIFGKGVGTLGTAAA
SGISVGVDGGSEEERVAFLRSVLGRARLEEDRATRAETRASLMVIADPSS
ALP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019335COG7