prot_H-elongata_contig168570.4272.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168570.4272.1
Unique Nameprot_H-elongata_contig168570.4272.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: D8LST1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST1_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.210e-62
Identity = 110/138 (79.71%), Postives = 122/138 (88.41%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMFIDEDTETAVKKALEAEMAKESQRKEEEG-GVERASV 137
            MPNAK+GSVTRDV  AVRAAKGGQAQFRAGKNG LH+G+GKVSF + DLIENVRATM+ ISNLKPEVIKGKY+SQVHLSSTMGKGVPVEVATVDPSSP+FMF+DE  E AVKKALEAE+AK    KE +G G +RAS+
Sbjct:  170 MPNAKLGSVTRDVEAAVRAAKGGQAQFRAGKNGALHMGVGKVSFARSDLIENVRATMVAISNLKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMFVDEGAEAAVKKALEAELAKAM--KEGDGAGEQRASL 305          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A7S4D8H6_HETAK (Ribosomal protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8H6_HETAK)

HSP 1 Score: 141 bits (355), Expect = 2.310e-38
Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMFIDE 105
            MPNAKVG++T D+  AV+AA GGQ +FRAGKNGVLH G GKVSF+K +L+EN++A M+ ISN KPE  KGKY+ Q HLSSTMG G+ V+VAT+DP SP+F F+DE
Sbjct:  220 MPNAKVGTITEDIESAVKAAMGGQVEFRAGKNGVLHAGFGKVSFEKNNLMENLKAFMVAISNAKPEGAKGKYIKQAHLSSTMGSGIKVDVATIDPGSPRF-FVDE 323          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A7S2V3Z6_9STRA (Ribosomal protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.010e-33
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFM 101
            MPN KVG++  DV  AV++A  GQ QFRAGKNGVLH GIGK+SFD  D++EN+R  M+ IS+ KPE  KGKY+  VH+SSTMG G+ ++   VDP S +FM
Sbjct:   36 MPNPKVGTIATDVKAAVKSALAGQVQFRAGKNGVLHAGIGKLSFDDQDILENIRTFMVAISDAKPEGAKGKYIKGVHMSSTMGPGIKIDTPYVDPGSARFM 136          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A067C8G8_SAPPC (Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8G8_SAPPC)

HSP 1 Score: 124 bits (310), Expect = 2.760e-32
Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFM 101
            MPN K+G+VT+DV+ A+ AAKGGQ +FRA K G++H G+GKVSF    LIEN+RA M+ I + KPE  KGKY+  +HLSSTMG G+ +E   +DPSSPQFM
Sbjct:  161 MPNPKLGTVTQDVSAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARLLDPSSPQFM 261          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A2D4BRJ5_PYTIN (Ribosomal protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRJ5_PYTIN)

HSP 1 Score: 122 bits (305), Expect = 2.020e-31
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMFID 104
            MPN K+G+VT+DVA A+ AAK GQ +FRA K G++H GIGKVSF +  L+EN+RA M+ IS+ KPE  KGKY+   HLSSTMG G+ +++  +DPSS QFM  D
Sbjct:  172 MPNPKLGTVTQDVADAINAAKAGQVEFRAEKKGIVHAGIGKVSFSEEALLENIRAFMVAISDAKPEGAKGKYIKAAHLSSTMGAGIALDIKYLDPSSAQFMRFD 275          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A7S2BLH2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BLH2_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.310e-31
Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMF 102
            MPN K+G+VT++VAV V+  KGGQ Q+RA KNG++H GIGKVSF    L EN+RA M+ ++N KPE +KGKY+   HL STMG G  +++  VDPSSP+FM 
Sbjct:  180 MPNPKLGTVTKNVAVGVKELKGGQVQYRAEKNGIVHAGIGKVSFTDEALSENIRAFMIALTNAKPESVKGKYIQAAHLCSTMGPGFKLDIKAVDPSSPRFMM 281          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A835YR92_9STRA (Ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR92_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.740e-31
Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMFIDED 106
            MPN K+G++T+D A AVRA+KGGQ Q+RA K+G +  G+GKV+F    L++NVRA M+ IS  KPE  KGKY+ Q ++SS+MGKGVPV +AT+DPS+ +FM I ++
Sbjct:  136 MPNPKLGTITKDTAPAVRASKGGQVQYRAFKDGQVLAGLGKVNFTHEQLMDNVRAFMLAISTSKPEGAKGKYMKQAYMSSSMGKGVPVTIATIDPSNGRFMLITQE 241          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A482S9K3_9ARCH (Ribosomal protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9K3_9ARCH)

HSP 1 Score: 120 bits (300), Expect = 7.130e-31
Identity = 56/102 (54.90%), Postives = 77/102 (75.49%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMF 102
            MPN K+G+VT+DVA AV AAK G  QF+  K G++  G+GK+SF    L+EN+R+ M+ I + KPE  KGKY+  VH+SSTMG G+PVE++++DPSSP+FM 
Sbjct:  152 MPNPKMGTVTKDVAKAVMAAKAGAIQFKVEKKGIIQAGVGKLSFASDSLLENIRSVMLAIQDSKPEGFKGKYIHTVHVSSTMGPGIPVELSSIDPSSPRFML 253          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A4D9CUC3_9STRA (Ribosomal protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUC3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.110e-31
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFMF 102
            MPN K+G+VT+DV  AV++A  GQAQF+A + G++H+G+GKV+F+   L+EN+R  M+ + N KPE  KGKYL  V L+STMGK VPVEVATVDP S +FM 
Sbjct:  201 MPNPKMGTVTKDVGAAVKSAMAGQAQFKADRFGMVHVGVGKVTFEPEALLENIRVLMVALGNAKPEGAKGKYLKGVFLTSTMGKAVPVEVATVDPRSSRFML 302          
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Match: A0A6G0WIL3_9STRA (Ribosomal protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIL3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.580e-31
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 0
Query:    1 MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLIENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQFM 101
            MPN K+G+VT+DV  A++AAKGGQ +FRA K G++H G+GKVSF    L+EN+RA M+ I   KPE  KGKY+   HLSSTMG G+ +E   +DPSSP FM
Sbjct:  160 MPNPKLGTVTQDVTAAIQAAKGGQVEFRAEKKGIVHAGVGKVSFSDEALVENIRAFMVAIGEAKPEGAKGKYIKACHLSSTMGPGIRLESRFLDPSSPHFM 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168570.4272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST1_ECTSI1.210e-6279.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4D8H6_HETAK2.310e-3865.71Ribosomal protein n=1 Tax=Heterosigma akashiwo Tax... [more]
A0A7S2V3Z6_9STRA2.010e-3358.42Ribosomal protein n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A067C8G8_SAPPC2.760e-3259.41Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=47... [more]
A0A2D4BRJ5_PYTIN2.020e-3157.69Ribosomal protein n=1 Tax=Pythium insidiosum TaxID... [more]
A0A7S2BLH2_9STRA2.310e-3156.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YR92_9STRA6.740e-3155.66Ribosomal protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A482S9K3_9ARCH7.130e-3154.90Ribosomal protein n=1 Tax=archaeon TaxID=1906665 R... [more]
A0A4D9CUC3_9STRA8.110e-3157.84Ribosomal protein n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A6G0WIL3_9STRA8.580e-3157.43Ribosomal protein n=1 Tax=Aphanomyces euteiches Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.190.20coord: 3..97
e-value: 1.0E-21
score: 78.9
NoneNo IPR availablePANTHERPTHR36427FAMILY NOT NAMEDcoord: 1..95
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 1..83
e-value: 1.5E-14
score: 54.3
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 1..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168570contigH-elongata_contig168570:8..1081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168570.4272.1mRNA_H-elongata_contig168570.4272.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168570 2..1081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168570.4272.1 ID=prot_H-elongata_contig168570.4272.1|Name=mRNA_H-elongata_contig168570.4272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
MPNAKVGSVTRDVAVAVRAAKGGQAQFRAGKNGVLHLGIGKVSFDKLDLI
ENVRATMMTISNLKPEVIKGKYLSQVHLSSTMGKGVPVEVATVDPSSPQF
MFIDEDTETAVKKALEAEMAKESQRKEEEGGVERASV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028364Ribosomal_L1/biogenesis
IPR023674Ribosomal_L1-like