prot_H-elongata_contig16836.4260.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16836.4260.1
Unique Nameprot_H-elongata_contig16836.4260.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length869
Homology
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BLAST of mRNA_H-elongata_contig16836.4260.1 vs. uniprot
Match: D7FLR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR9_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.540e-6
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 0 
Query:  811 KVKEASDSGDVWADFGYDDGYXXXXXDSDAESEFTPQEALEVLRRAAVRYSSSSTASYG 869
            KV E + +G VWADFG  +GY  XXX  DAESE+TP+EA+EVLR+AA+RYS++  A+ G
Sbjct:  839 KVGEGAGAGGVWADFGCTEGYGDXXXXXDAESEYTPEEAIEVLRKAAIRYSTAGRAAAG 897
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BLAST of mRNA_H-elongata_contig16836.4260.1 vs. uniprot
Match: A0A6H5L4Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z9_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 9.160e-5
Identity = 44/106 (41.51%), Postives = 57/106 (53.77%), Query Frame = 0 
Query:  778 EEDVFAKFDAVEEAPRPSLSAAIIAEKKKRPE--------------EKVKEASDSGDVWADFGYDDGYXXXXXDSDAESEFTPQEALEVLRRAAVRYSSSSTASYG 869
            E+DVF KFD  E  P  ++      E +   E               K  E + +G VWADFG  DGY XXXX     SE+TP+EA+EVLR+AA+RYS++  A  G
Sbjct:  889 EDDVFTKFDN-EAMPMAAVPTTATTESEPSAEGAPSSPRGDAAAAGNKTGEGAGAGGVWADFGCTDGYGXXXXXXXXXSEYTPEEAIEVLRKAAIRYSTAGRAVAG 993
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16836.4260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLR9_ECTSI1.540e-659.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4Z9_9PHAE9.160e-541.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16836contigH-elongata_contig16836:1516..4491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16836.4260.1mRNA_H-elongata_contig16836.4260.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16836 1516..4491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16836.4260.1 ID=prot_H-elongata_contig16836.4260.1|Name=mRNA_H-elongata_contig16836.4260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=869bp
DTVKVDDGVRPTTVAAHATGVDCDQSDLIMVGKDASRPPPLICSSPLMAK
EEKKPLAVLLFHSPTSGSRGGDRSTTDRDLDQALEEESSSSSSSSVEISE
LESVSDSDWTRDHRSPENSPAERQQRDNARAAARFLGVPTKILRKTPRIP
SSPLPPSPTGSTISSPMAEVVVLPVVEEGQTRSQEDEEQQRQEADYLLKA
GVARLAGQRLATASAALSGGGGKGTSDPPSATGGVATTITAGAAGAAAAA
AAAAAAAFRIRHSASPSPPRPPQYWTPWRSFSEDGDGIEIDGFGRGVYPT
MNEEEAAAAAAEETSPGTALWQFLIGLGSPDEMLPPSSSPMPEANSQPLV
VCGDNVSEDEDEMLLSAELEEDFGDREEEDEGRGMRMMVMGEGYRTGLLA
GMVMTSIMEEQAEDEESEKASSARSCSSPSPSDDQQGQEEADGEKEEAYD
CRRASGGRSSVQSDVSSEGDGCRRSCDLLALSDAGRAEEEEDEEQEDDDD
DDDEEVWVWSPDDVEMCSEFSCSVGDHATGSSSSSTTTQEEGGPWDAATG
GPWEAGVPMDTVEDEASGGTSARKMGMGSSSSSRGSLTREMIKRRRSASS
GRRKSSACSAISKSAPPVAVAEGDDADRPSTPEVTGSAFTSEDEEKMPLQ
LQDGSPPSPDAAAAAAATSSSAASTAATNQGEDNGGGGSVITLFEEEIKP
PRAADGYADGSCYPESDVVAAVPMEKEDLIATSRRSSPEKGRASAAEEGG
DHPAVPSIDVRISIDARSRSSSSSSLSEEDVFAKFDAVEEAPRPSLSAAI
IAEKKKRPEEKVKEASDSGDVWADFGYDDGYGHGFGDSDAESEFTPQEAL
EVLRRAAVRYSSSSTASYG
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