prot_H-elongata_contig168058.4246.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168058.4246.1
Unique Nameprot_H-elongata_contig168058.4246.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
[Close]
BLAST of mRNA_H-elongata_contig168058.4246.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.640e-16
Identity = 51/98 (52.04%), Postives = 55/98 (56.12%), Query Frame = 0 
Query:    1 QWVPPWLCLVSKTLQSAVDADNSADEDEDQETPGDRNENGLSLGAAGSGGVGAAAGSRFGGREFSVELEALRTGMVLLTHVPSAVGDGHLGQLLSPLW 98
            Q VPPWL LVSKTLQSAVD          +   GDR++NG                      +F VELE LRT MVLL HVPS VGDGHLGQLL PLW
Sbjct:  280 QCVPPWLHLVSKTLQSAVDG---------RAIGGDRDKNGXXXXXX------------XXXXDFGVELEGLRTAMVLLAHVPSTVGDGHLGQLLPPLW 356
[Close]
BLAST of mRNA_H-elongata_contig168058.4246.1 vs. uniprot
Match: A0A6H5L6E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E1_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 9.360e-15
Identity = 49/98 (50.00%), Postives = 53/98 (54.08%), Query Frame = 0 
Query:    1 QWVPPWLCLVSKTLQSAVDADNSADEDEDQETPGDRNENGLSLGAAGSGGVGAAAGSRFGGREFSVELEALRTGMVLLTHVPSAVGDGHLGQLLSPLW 98
            Q VPPWL LVSKTLQSAVD          +   G R++N                       +F VELE LRT MVLL HVPS VGDGHLGQLL PLW
Sbjct:  167 QCVPPWLHLVSKTLQSAVDG---------RAIDGGRHKNXXXXXXX------------XXXXDFGVELEGLRTAMVLLAHVPSTVGDGHLGQLLPPLW 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168058.4246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8B3_ECTSI1.640e-1652.04Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5L6E1_9PHAE9.360e-1550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168058contigH-elongata_contig168058:187..1094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168058.4246.1mRNA_H-elongata_contig168058.4246.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168058 187..1095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168058.4246.1 ID=prot_H-elongata_contig168058.4246.1|Name=mRNA_H-elongata_contig168058.4246.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
QWVPPWLCLVSKTLQSAVDADNSADEDEDQETPGDRNENGLSLGAAGSGG
VGAAAGSRFGGREFSVELEALRTGMVLLTHVPSAVGDGHLGQLLSPLW
back to top