prot_H-elongata_contig16791.4236.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16791.4236.1
Unique Nameprot_H-elongata_contig16791.4236.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length244
Homology
BLAST of mRNA_H-elongata_contig16791.4236.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.080e-56
Identity = 98/232 (42.24%), Postives = 139/232 (59.91%), Query Frame = 0
Query:   18 VVISMTNKDKHALPVGEDCPWSHGRGIALPNERNLCGTVGHAPIKGETDLWRCMKETNCGIVDDRLQMVVLRDPRAVAVSSYYHI---DREHQKMNQTVDDFSVAFLPITCMWVTLRFLLFEGILSGQSTVYWYEDAYEDPLGWHRQFLYSVGLNLP----DAVVSEATHRSVQGGNIMNFPAKGIDRHDGGEQAAMGRSFRDEVMPKTLLKMDHILRLWLPPVLLMKFGIP 242
            V IS++  DKH LPV E CPWSHG G    +E + C +    P++   DLW CM++T C I D+RLQ V +RDPRAVAVS+Y+H    D  +QK++ ++D   +  LP+ C + TLR +LF G+LS ++ ++WYE   EDP  WH ++    GL LP    D +V+E            N   K ++ H GG + +  R+++DEV P    +MD ILR WLP VLL ++GIP
Sbjct:    5 VEISISTVDKHRLPVNESCPWSHGSGTV--HEGDGCWSFDGHPVETGADLWACMQKTPCEITDNRLQFVPIRDPRAVAVSTYFHRVHKDNNYQKLHPSLDQTVLEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILPGGWIDGMVAE------------NQAHKHLNPHPGGAETSDNRTWQDEVSPGIRPEMDSILRKWLPGVLLARYGIP 222          
BLAST of mRNA_H-elongata_contig16791.4236.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 7.230e-54
Identity = 96/245 (39.18%), Postives = 144/245 (58.78%), Query Frame = 0
Query:    2 AAGDEEKSCECKSVESVVISMTNKDKHALPVGEDCPWSHGRGIALPNERNLCGTVGHAPIKGETDLWRCMKETNCGIVDDRLQMVVLRDPRAVAVSSYYHIDREHQKM-----NQTVDDFSVAFLPITCMWVTLRFLLFEGILSGQSTVYWYEDAYEDPLGWHRQFLYSVGLNLPDAVVSEATHRSVQGGNIMNFPAKGIDRHDGGEQAAMGRSFRDEVMPKTLLKMDHILRLWLPPVLLMKFGI 241
            A G     C C +V+ V I +++  KH LPV   CPW H   +   N+   C TV    +   TD   C+++  C IVDDR+QM++LRDPRAVAVSS++H+   H        +++VD F +  LP  C ++ LR+L+    L G++  + Y+++  DPL WH+++L SVGL  P  VV +AT+ S++      F  KG+D+H GG++A   R++ DE+      +++ I R WLPPVLL KFGI
Sbjct:  182 AGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPENKG--CTTVNGRRVGNYTDTVECLQQHPCRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLR--REYGFAGKGVDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGI 422          
BLAST of mRNA_H-elongata_contig16791.4236.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.890e-34
Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 0
Query:   78 IVDDRLQMVVLRDPRAVAVSSYYHIDR------EHQKMNQTVDDFSVAFLPITCMWVTLRFLLFEGILSGQSTVYWYEDAYEDPLGWHRQFLYSVGLNLP-------DAVVSEATHRSVQGGNIMNFPAKGIDRHDGGEQAAMGRSFRDEVMPKTLLKMDHILRLWLPPVLLMKFGIP 242
            ++DD LQ  VLRDPRAVAVS+Y+++        +H    +++D+  +  LP  C + T+R LLF+G LS +S ++WYEDA  DPLGWH ++    G  LP       DA + EA  +  +            D H GG+Q +  R++ DE+ P    +MD ILR WLP VLL + GIP
Sbjct:   25 LLDDSLQFAVLRDPRAVAVSTYFYVKSHPAFYSDHVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIKDIDATLPEAQQKVKR------------DPHPGGQQVSSKRTWEDEISPAIREEMDSILRTWLPGVLLERLGIP 190          
BLAST of mRNA_H-elongata_contig16791.4236.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 9.480e-31
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 0
Query:   88 LRDPRAVAVSSYYHIDRE-----HQKMNQTVDDFSVAFLPITCMWVTLRFLLFEGILSGQSTVYWYEDAYEDPLGWHRQFLYSVGLNLPDAVVSEATHRSVQGGNIMNFPAKGIDRHDGGEQAAMGRSFRDEVMPKTLLKMDHILRLWLPPVLLMKFGIPS 243
            +RDPRAVAVS+Y++I R      H    +++D+  V  LP  C + T+R +LF+G LS +S ++WYEDA  DPLGW+ ++    G  LP   + +      +         +  + H GG+  +  R++ DEV P+T L+M+ ILR WLP VLL +F +P+
Sbjct:    1 MRDPRAVAVSTYFYIKRSPIHLHHPSRGKSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWIKDIQASLTEAAEND----RKREPHPGGQVVSSDRTWEDEVSPETRLEMNSILRTWLPGVLLARFDVPA 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16791.4236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KDV7_9PHAE2.080e-5642.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJE4_ECTSI7.230e-5439.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG38_9PHAE2.890e-3439.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T4_ECTSI9.480e-3137.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 62..216
e-value: 1.7E-6
score: 29.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 86..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16791contigH-elongata_contig16791:65..1366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16791.4236.1mRNA_H-elongata_contig16791.4236.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16791 47..1366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16791.4236.1 ID=prot_H-elongata_contig16791.4236.1|Name=mRNA_H-elongata_contig16791.4236.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=244bp
MAAGDEEKSCECKSVESVVISMTNKDKHALPVGEDCPWSHGRGIALPNER
NLCGTVGHAPIKGETDLWRCMKETNCGIVDDRLQMVVLRDPRAVAVSSYY
HIDREHQKMNQTVDDFSVAFLPITCMWVTLRFLLFEGILSGQSTVYWYED
AYEDPLGWHRQFLYSVGLNLPDAVVSEATHRSVQGGNIMNFPAKGIDRHD
GGEQAAMGRSFRDEVMPKTLLKMDHILRLWLPPVLLMKFGIPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase