prot_H-elongata_contig16783.4232.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16783.4232.1
Unique Nameprot_H-elongata_contig16783.4232.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length444
Homology
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: D7FVN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN3_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 2.760e-131
Identity = 256/473 (54.12%), Postives = 304/473 (64.27%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSFVLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQIISLRAAISTIQTSSTAVKGDSSKSTSLTRSRTVDIPGGGEPPTAESLVSEAMSVFEKTENALPCSRLALTAHDFVGLVSGRGSIASFMRSPSPKPTSRPTRDNLISKPACARSAVSDEGKSAGLLPQASKDVGNRVECDGNGANGGDALSPEGAGS------------------RGGDGGGSEIS-SKNYTG-----------RLNPSP-EPGDERCPNCGDAIASKKFLEHLDFHFAQGLQERYTREVDVAADIAARASGSGAAKRRSAEGDERGPTRRPKAKQPVRRGSNGGTTARIDSFFKP 442
            MR AVE+ELGFTVSAGIASNK LAKLASS NKPNKQT+V AGASS+MLD+VP+R +RGLGGKLGE+V SWS AE AS+LKRF+Q +LV NFG KTG+WLWR CRGMDDE V PNL+PKSLSVCKSF  V D E+VL WM+LL  EL+ RI VDR+ WSRRATKLT+Q+ISL+      Q    A  G+   +TS TRSRTVDIPGGGE PT  SLVSEAM+VF KT+NALPCSRLALTAH+F GL+SGRGSIASF+R+        P             ++  ++  S G+ P A +     +  D +G  GG    PEG                     R G    S +  S+N+             R  PSP  PG ERCP CG  +A +   EHLDFH+A+GLQERYTRE DVA D+AAR S      +R  +  E G  +R  AK   +R + G    RIDSFFKP
Sbjct:  191 MRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAEKASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDDEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRD--AGGGNGKSNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGLISGRGSIASFLRA-------LPXXXXXXXXXXXXXTSPLEKWGSKGVKPDAKQ----ALAVDPSGQAGGGRSLPEGDDEDVPGTETAEASIGPRDVPRVGSKDDSRVDRSRNFQPSSHLAGAACDERTAPSPLRPGYERCPKCGKVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQ--EAGGGKR--AKSQTKRPAAG---LRIDSFFKP 643          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A0G4ETT1_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETT1_VITBC)

HSP 1 Score: 167 bits (422), Expect = 4.190e-42
Identity = 105/263 (39.92%), Postives = 149/263 (56.65%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVAS-WSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSFVLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQIISLRAAISTIQTSSTAVKGDSSKSTSLTRSRTVDIPGGGEPP---TAESLVSEAMSVFEKT--ENALPCSRLALTAHDFVGLVSGRGSIASFMR 257
            +R AV  E  FTVSAGI+ NK L+K AS+++KPN+QTLV   +  +M+  +P+RD+RGLGGKLGE+V+  +  A TA +L+  +  EL   F   TG WLWR+CRGMDDE V+PNL+PKSL   KSF  V   E +  W+ +L +E+ DR+  D +   RRA  L  Q   L  A                      RSR+  +P G +P    + + LV+  +++  K   +  LPCSR+ + A DF  + S   SI S+ +
Sbjct:  211 LRKAVLDETQFTVSAGISHNKMLSKQASAKHKPNRQTLVPTSSIDDMMGHLPLRDVRGLGGKLGEAVSRVFPDATTAKDLQAHSLEELKRTFNDGTGTWLWRVCRGMDDEQVSPNLKPKSLLAFKSFRPVRKMEDLERWLGVLAEEVCDRMQADTEAHRRRAKTLMAQHRGLSGAA---------------------RSRSGPMPRGKDPHGLLSKDELVAAGLALLRKLPEDELLPCSRIGMGAQDFEDIDSQTASITSYFK 452          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A7S2SV00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV00_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.680e-35
Identity = 151/510 (29.61%), Postives = 230/510 (45.10%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASW---------SGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSFVLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQIIS-------------LRAAISTIQTSSTAVKGD---------SSKSTSLTRSRTVD------------IPGGGEPPTAES--------------LVSEAMSVFEKTEN-----ALPCSRLALTAHDFVGLVSGRGSIASFMRSPSPKPTSRPTRDNLISKPACARSAVSDEGKSAGLLPQASKDVGNRVECDGNGANGGDALSPEGAGSRGGDGGGSEISSKNYTGRLNPSPEPGDERCPNCGDAIASKKFLEHLDFHFAQGLQERY-TREVDVAADIAARASGSGAAKRRSAEGDERGPTRRPKAKQPVRRG--SNG----GTTARIDSFFK 441
            +R  +  E  FTVSAGIA  K  AK+AS+++KPNKQT+V   ++ E++ ++ + D+RGLGGKLGE V+++          G   A  L+   +  L+  FG KTG+WL RICRG+D + V+PNLRPKS++  KSF  +     +L W+ +L  EL DRI  D   + RR   LT+Q  S             + + ++ +++ S A+            SSK +   + ++VD              G  EP  +E               L S A  V  K EN      LPCSR+AL   DF         ++ F+++       +P R     K +   SA S +G + G  P                  G DA+   G+ ++   G G+ + +                 C  CG +IA     EH+DFHFA  +Q+++ ++E   ++D   R               + GP R+ KA    + G  S+G    G  +RIDSFF+
Sbjct:  194 LRRKIREETTFTVSAGIAHGKMFAKIASAKHKPNKQTIVPFASTEELMRTIELSDIRGLGGKLGEEVSTFLRSQDTPKTDGTFRAIALQAVPERLLIRQFGEKTGRWLHRICRGLDTDPVSPNLRPKSINCFKSFSTITAMAPLLRWLDVLCGELTDRIAADHALFKRRPRVLTLQHRSTLRPDHLKNWKAGVTSELTGMRSRSAALPPSLVSLILACYSSKQSKKRKRQSVDGAATPLVDSIQVHSGDAEPLGSEGETTPLTSSPAFPAELQSLARLVMSKLENDSGVPTLPCSRIALGVSDFCSESKASRVLSDFLKA-------QPCR-----KTSAESSAESSDGHT-GPRP------------------GHDAVGDSGSPAQAAAGDGNLVRTT----------------CERCGASIALDAIQEHMDFHFAADVQQQWRSQEAKQSSDKQQR---------------KPGPVRK-KATTKTKTGAASSGLASHGPFSRIDSFFQ 640          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A835YYX1_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX1_9STRA)

HSP 1 Score: 148 bits (374), Expect = 6.240e-35
Identity = 101/240 (42.08%), Postives = 144/240 (60.00%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSFVL-VHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQIISLRAAISTIQTSSTAVKGDSSKSTSLT-RSRTVDIPGGGEP---PTAESLVSEAMSVFEK-TENALPCSR 234
            +R+AV  ELG+TVSAGIA  K  AKLAS+R+KP+KQTLV A A++ +L  VP+R++RGLGGKLG  VA+ + A+  ++L+R+++A+L + FG K G WL  I +G+DDE V  N+ PKSL+  KS        + V  W+ +L  EL +R   D     RR T L VQ       +         V G ++  T +T RS  + +  GG     P+AE LV+ A+S+F K  +  LPC+R
Sbjct:  618 VRAAVRAELGYTVSAGIAHCKMFAKLASARHKPDKQTLVPASATAHLLAGVPLREVRGLGGKLGADVAARTHAQNLADLQRYSEAQLRSLFGDKGG-WLASIAQGIDDEPVVANIAPKSLNCFKSLPEPARSADAVRAWLHVLGGELLERAAADAAAHRRRPTTLVVQ----HRGVLRADHRDNWVAGRTADLTGMTARSARLPVGSGGGALSLPSAEQLVAAALSLFHKCADQPLPCTR 852          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A8C4NJT5_DICLA (Polymerase (DNA directed), eta n=5 Tax=Moronidae TaxID=42148 RepID=A0A8C4NJT5_DICLA)

HSP 1 Score: 144 bits (362), Expect = 1.580e-33
Identity = 78/171 (45.61%), Postives = 107/171 (62.57%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSF---VLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQI 168
            MR+AVE+  GF  SAGI+ NK LAKLA   NKPN+QT++   + +E+  S+P+  +R LGGKLG S+    G E   +L RF+QA+L  NFG KTGQWL+ +CRG+D EAV P   PKS+   K+F     +  +E V  W+  L  EL +R+  D++   R A  LTV +
Sbjct:  207 MRAAVEKHTGFRCSAGISHNKVLAKLACGLNKPNRQTILPLDSVTELFSSLPISKIRNLGGKLGASITETLGIENMGDLTRFSQAQLEQNFGEKTGQWLYDLCRGIDFEAVKPRQLPKSIGCSKNFPGKTSLATKEQVQYWLHQLALELEERLTKDKEVNGRVAKLLTVGV 377          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A8J4GB80_9CHLO (UmuC domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GB80_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 7.770e-33
Identity = 92/245 (37.55%), Postives = 127/245 (51.84%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSFVLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQIISLRAAISTIQTSSTAVKGDSSKSTSLTRSRTVDIP---GGGEPPTAESLVSEAMSVFEKTENALPCSRLALTAHDF 242
            MR AV  EL FT SAG+A+NK LAK+ S+RNKP+KQT+V      +++  +P+  LRGLGGKLG S+    GA  A + ++ +  +L    G +TG W+ ++ RG   E VTP  +PKSL  CKSF    D   +  W+ +L +ELA R   D  T  RRA  L +    +                         R R+V  P    G E P+   L   AM +  +  +ALPCSRLA+ A +F
Sbjct:  309 MRRAVRSELDFTCSAGVATNKLLAKVGSARNKPDKQTVVLPRGVPDLMQDMPLSKLRGLGGKLGASLEQHFGATNAGQAQQLSLEQLQRVLGERTGLWVSQVVRGQCSEPVTPKDKPKSLLSCKSFESTRDLGDLGRWLSILAEELAQRCREDEATHRRRARTLVLHYRGIGP-----------------------RERSVRCPMPQHGREGPSPAVLAKAAMEMLRRQSDALPCSRLAIAATEF 530          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A8C5MVL7_9ANUR (DNA polymerase eta n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MVL7_9ANUR)

HSP 1 Score: 141 bits (355), Expect = 7.910e-33
Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSF---VLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTV 166
            MR+AVE+E GFT SAGIA NK LAKLA   NKPN+QT++S  +  E+ + +PV  +R LGGKLG+SV    G E   +L +F+Q+ L  +FG KTG WL+ +CRGM+DE V P   PKS+   K+F     +  +E V  W+  L  EL +R+  D+   +R A  L V
Sbjct:  201 MRTAVEKETGFTCSAGIAHNKVLAKLACGLNKPNRQTILSRSSVPELFNQLPVGKIRHLGGKLGDSVKELLGVEYMGQLTKFSQSHLQKHFGDKTGSWLYFLCRGMEDEPVKPRQLPKSIGCSKTFPGKTSLSTKEQVQYWLLQLATELEERLRKDKDANNRTAKLLNV 369          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A8B7RCA4_HIPAR (DNA polymerase eta isoform X2 n=2 Tax=Microchiroptera TaxID=30560 RepID=A0A8B7RCA4_HIPAR)

HSP 1 Score: 140 bits (352), Expect = 1.470e-32
Identity = 75/171 (43.86%), Postives = 109/171 (63.74%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSF---VLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQI 168
            MR+A+ER+ GF  SAGI+ NK LAKLA   NKPN+QTLVS G+  ++   +P+  +R LGGKLG SV    G E   EL +FT+++L ++FG K+G WL+ +CRG++ + V P   PK++   K+F     +   + V  W+  L +EL +R++ DR    R AT+LTV I
Sbjct:   76 MRAAIERQTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSHMPIGKIRSLGGKLGASVIEILGVEYMGELTQFTESQLQSHFGEKSGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATPDQVQWWLWQLAQELEERLIKDRNDNDRVATQLTVSI 246          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A8C5MRZ8_9ANUR (DNA polymerase eta n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MRZ8_9ANUR)

HSP 1 Score: 141 bits (355), Expect = 1.610e-32
Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSF---VLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTV 166
            MR+AVE+E GFT SAGIA NK LAKLA   NKPN+QT++S  +  E+ + +PV  +R LGGKLG+SV    G E   +L +F+Q+ L  +FG KTG WL+ +CRGM+DE V P   PKS+   K+F     +  +E V  W+  L  EL +R+  D+   +R A  L V
Sbjct:  334 MRTAVEKETGFTCSAGIAHNKVLAKLACGLNKPNRQTILSRSSVPELFNQLPVGKIRHLGGKLGDSVKELLGVEYMGQLTKFSQSHLQKHFGDKTGSWLYFLCRGMEDEPVKPRQLPKSIGCSKTFPGKTSLSTKEQVQYWLLQLATELEERLRKDKDANNRTAKLLNV 502          
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Match: A0A671E7H5_RHIFE (DNA polymerase eta n=4 Tax=Microchiroptera TaxID=30560 RepID=A0A671E7H5_RHIFE)

HSP 1 Score: 140 bits (354), Expect = 1.730e-32
Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 0
Query:    1 MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDSVPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLWRICRGMDDEAVTPNLRPKSLSVCKSF---VLVHDRETVLMWMKLLTKELADRIVVDRKTWSRRATKLTVQI 168
            MR+A+ER+ GF  SAGI+ NK LAKLA   NKPN+QTLVS G+  ++   +P+  +R LGGKLG SV    G E   EL +FT+++L ++FG K+G WL+ +CRG++ + V P   PK++   K+F     +  RE V  W+  L +EL +R+  DR    R AT+L V I
Sbjct:  200 MRAAIERQTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSHMPIGKIRSLGGKLGASVIEILGVEYMGELTQFTESQLQSHFGEKSGSWLYAMCRGIEHDPVKPRQIPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLAVSI 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16783.4232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVN3_ECTSI2.760e-13154.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4ETT1_VITBC4.190e-4239.92UmuC domain-containing protein n=2 Tax=Vitrella br... [more]
A0A7S2SV00_9STRA4.680e-3529.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YYX1_9STRA6.240e-3542.08UmuC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A8C4NJT5_DICLA1.580e-3345.61Polymerase (DNA directed), eta n=5 Tax=Moronidae T... [more]
A0A8J4GB80_9CHLO7.770e-3337.55UmuC domain-containing protein n=1 Tax=Volvox reti... [more]
A0A8C5MVL7_9ANUR7.910e-3346.15DNA polymerase eta n=1 Tax=Leptobrachium leishanen... [more]
A0A8B7RCA4_HIPAR1.470e-3243.86DNA polymerase eta isoform X2 n=2 Tax=Microchiropt... [more]
A0A8C5MRZ8_9ANUR1.610e-3246.15DNA polymerase eta n=1 Tax=Leptobrachium leishanen... [more]
A0A671E7H5_RHIFE1.730e-3244.44DNA polymerase eta n=4 Tax=Microchiroptera TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001126UmuC domainPFAMPF00817IMScoord: 1..28
e-value: 1.5E-5
score: 25.0
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 1..60
score: 17.502
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 113..243
e-value: 1.7E-6
score: 28.7
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 111..243
e-value: 2.7E-15
score: 58.7
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 116..243
NoneNo IPR availableGENE3D1.10.150.20coord: 53..110
e-value: 8.8E-20
score: 72.3
NoneNo IPR availableGENE3D3.30.70.270coord: 1..51
e-value: 3.6E-17
score: 65.1
NoneNo IPR availablePIRSFPIRSF036603DNA_pol_etacoord: 1..198
e-value: 9.3E-56
score: 187.6
coord: 332..443
e-value: 0.0011
score: 15.5
NoneNo IPR availablePANTHERPTHR45873FAMILY NOT NAMEDcoord: 1..442
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..111
IPR041298Ubiquitin-binding zinc fingerPFAMPF18439zf_UBZcoord: 353..380
e-value: 2.0E-8
score: 33.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16783contigH-elongata_contig16783:3896..7186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16783.4232.1mRNA_H-elongata_contig16783.4232.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16783 3841..7267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16783.4232.1 ID=prot_H-elongata_contig16783.4232.1|Name=mRNA_H-elongata_contig16783.4232.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=444bp
MRSAVERELGFTVSAGIASNKALAKLASSRNKPNKQTLVSAGASSEMLDS
VPVRDLRGLGGKLGESVASWSGAETASELKRFTQAELVTNFGPKTGQWLW
RICRGMDDEAVTPNLRPKSLSVCKSFVLVHDRETVLMWMKLLTKELADRI
VVDRKTWSRRATKLTVQIISLRAAISTIQTSSTAVKGDSSKSTSLTRSRT
VDIPGGGEPPTAESLVSEAMSVFEKTENALPCSRLALTAHDFVGLVSGRG
SIASFMRSPSPKPTSRPTRDNLISKPACARSAVSDEGKSAGLLPQASKDV
GNRVECDGNGANGGDALSPEGAGSRGGDGGGSEISSKNYTGRLNPSPEPG
DERCPNCGDAIASKKFLEHLDFHFAQGLQERYTREVDVAADIAARASGSG
AAKRRSAEGDERGPTRRPKAKQPVRRGSNGGTTARIDSFFKPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC
IPR017961DNA_pol_Y-fam_little_finger
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR041298Znf_UBZ