prot_H-elongata_contig1677.4226.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1677.4226.1
Unique Nameprot_H-elongata_contig1677.4226.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length544
Homology
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 505 bits (1301), Expect = 2.280e-168
Identity = 317/593 (53.46%), Postives = 372/593 (62.73%), Query Frame = 0
Query:    4 LDEEKRLRKQCEAERVRLAIENESLKDRLARLTLREDATIAAGQSTDGRRSRQTPAA-------SCCLTLGRPLQPTSS---------------TPPPG---PTPRVMQGRRSSAVPSLPAAGTINNTSSGNGHGSGN------ECGENAFGEADTTTRLRFELTLSKGLRSGRVAEFAGGEAGALLVSQEFRAAAGARGLMRHGVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDDELLCATMGGVWALRGATKGAEPRTSASGDRQESVAEQLQIQAGPCCSLSESRGS--SRESDVSMRRFLVSTRGSSASHTIFGLEESRTSPNMAALAEYTRVEDRASN---LEATHEARRGNGGYSLVPENNNSMAE-----RRLPVS---GIS-----------AWASRWKAVPFVAQGHQSRHALSRSLLWAPTTGDNLFIAGGDEGTNQPWIWDAMTGQVCRRLASHASPVLDVALLEGRSWGVGLLAAVSQGEMKMYQT 541
            L+EEKRLRKQCEAERVR++IEN SLKDRL+RL  +  A + +      + S  TP         S   T GR     SS               TP P    P P     R  +  P  P    I N   G G GSG       E G      A +T  +RFE  LS+ + SGRVA FAGG AGAL+VSQE   A G+RG +RHGVTKFSLAD R+ K+I LHREQ+RDVKFSA+ G  GY+LSTSFD+TLKVCDLRTDSVV++Y +EG+GWSCQWS+T   QMFCG+VD +R+SAV LFDLRSTAGAVRKLRAAA+Q+QP+HS+CHT DD L CATMGGVWA  G TK  E   S + D +E  AE+LQIQAG CCSLS+S G+  S  SDV  + FLVSTRGSSASH +F L  +  S   AA A   R    A +    E   E RR  GGY  + E+ +   E      R P S   G S           +WA RW   P VAQGHQS+H LSRSLLW P+ GD L IAGGDE T QPW+WDA+TG VC RLASH SPVLD A L+  S G GLL+AVSQ E+K+YQT
Sbjct:  197 LEEEKRLRKQCEAERVRVSIENASLKDRLSRLN-QGGAGVVSSSVARSQESVSTPGCPKPIRTLSQFATPGRAGPGVSSVAYSSSVDIGSSSFMTPCPKISHPGPAAAYSRFKTPPPRRP----IGNLDVGAGGGSGGRGLAATESGSEGAA-AGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQLRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTTPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTK--EGGGSEAWDPEELAAEKLQIQAGACCSLSQSHGTAASSSSDVDQQPFLVSTRGSSASHAVFRLASASASSRQAATAAGVRENPTAESHKDQEVAVEGRRDAGGYVAMEEDQSERFECEHATERQPSSFGFGSSLARLSAMVARRSWADRWTRSPRVAQGHQSQHTLSRSLLWDPSPGDGLLIAGGDERTKQPWMWDALTGDVCNRLASHRSPVLDFACLQDYSSGKGLLSAVSQSEIKVYQT 781          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 1.220e-138
Identity = 275/545 (50.46%), Postives = 330/545 (60.55%), Query Frame = 0
Query:    4 LDEEKRLRKQCEAERVRLAIENESLKDRLARLTLREDATIAAGQSTDGRRSRQTPAASCCLTLGRPLQPTSSTPPPG------------------------PTPRVMQGRRSSAVPSL---PAAGTINNTSSGNGHGSGN------ECGENAFGEADTTTRLRFELTLSKGLRSGRVAEFAGGEAGALLVSQEFRAAAGARGLMRHGVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDDELLCATMGGVWALRGATKGAEPRTSASGDRQESVAEQLQIQAGPCCSLSESRGSSR--ESDVSMRRFLVSTRGSSASHTIFGLEESRTSPNMAALAEYTRVEDRASN---LEATHEARRGNGGYSLVPENNNSM------AERRLP-----------VSGISA---WASRWKAVPFVAQGHQSRHALSRSLLWAPTTGDNLFIAGGDEGTNQ 490
            L+EEKRLRKQCEAERVR++IEN SLKDRL+RL    D   A   S+   RS+ + +   C    R L   ++   PG                        P P++     + A P     P    I N   G G GSG       E G        +T  +RFE  LS+ + SGRVA FAGG AGAL+VSQE   A G+RG +RHGVTKFSLAD R+ K+I LHREQVRDVKFSA+ G  GY+LSTSFD+TLKVCDLRTDSVV++Y +EG+GWSCQWS+T   QMFCG+VD +R+SAV LFDLRSTAGAVRKLRAAA+Q+QP+HS+CHT DD L CATMGGVWA  G TK  E   S + DR+E  AE+LQIQAG CCSLS+S G++    SDV  + FLVSTRGSSASHT+F L  +      AA A        A +    E   E +R  GG   + E+ +        A  R P           +S + A   WA RW   P VAQGHQS+H LSRSLLW P+ GD L IAGGDE T Q
Sbjct:  122 LEEEKRLRKQCEAERVRVSIENASLKDRLSRL----DQGGAGVVSSIVARSQGSVSTPGCPKPKRTLSQLAT---PGGAGPGVSSVAYSSSVDIGSNSFMTPCPKISHSGPAVAYPQFKTPPPRRPIGNLDVGAGGGSGGWGLAATESGSEGAA-VGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQVRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTAPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTK--EGGVSEAWDREEQAAEKLQIQAGACCSLSQSHGTAAASSSDVDQQPFLVSTRGSSASHTVFRLAPASACSRQAAAAAGVGENPTAESHKDQEVAVEGQRDAGGNVAMEEDQSEEKFECEHAVERQPSSLGFDTSLARLSAVVARRSWADRWTRSPRVAQGHQSQHTLSRSLLWDPSPGDGLLIAGGDERTKQ 656          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A6P8J5H9_ACTTE (E3 ubiquitin-protein ligase RFWD3-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J5H9_ACTTE)

HSP 1 Score: 99.0 bits (245), Expect = 4.090e-18
Identity = 94/375 (25.07%), Postives = 158/375 (42.13%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDD--------ELLCATMGGVWALRGATKGAE--PRTSASGDRQESVAEQLQIQAGPCCSLSESRGSSRESDVSMRRFLVSTRGSSASHTIFGLEESRTSPNMAALAEYTRVEDRASNLEATHEARRGNGGYSLVPENNNSMAERRLPVSGISAWASRWKAVPFVAQGHQSRHALSRSLLW-APTTGDNLFIAGGDEGTNQPWIWDAMTGQVCRRLASHASPVLDVALLEGRSWGVGLLAAVSQGEMKMYQ 540
            GV K S  D ++ + + +H++ +RD  FS +  G G +L+   D+T+K+  + +++VV  YS     WSC W  +DSN M+CG+++ S     ++FD+R+T   ++ L+   +   PV S+ H   D         LL   +GG      +T G +  P T             L +  G C SLS               F   TR     H +F L  S+  P       +   E + + +  +    +     S  P   +  A     V  +    S+ + V     G   +  LSRS L+ +P   ++L +A  DE      +WD  TG   ++L      VLDV  L     G   L  +++ ++ +Y+
Sbjct:  335 GVLKVSSLDVKHSEFVQIHQKPLRDACFSCQ--GDGLLLTAGMDKTVKITSMISNTVVQSYSTPVPAWSCAWDNSDSNYMYCGLMNGS----CLMFDVRNTNTFLKNLKTEGDSSCPVISLAHVKPDINSKLRPGGLLVCKLGGACFWE-STFGVDYLPHT-------------LMLPEGSCTSLS---------------FEPKTR-----HCMFSLRPSKNLPK----TRHVVCELQGNGIGVSTARAQSEDDPSTAPNEADGSASN---VGSLITCNSKMQCV-----GGPIQKLLSRSSLFTSPDNSESLIVAAPDEAAKATLLWDGFTGNKLQKLPYQGETVLDV--LPFTVNGHSFLTTITEQKLDVYR 655          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A433CZA3_9FUNG (RING-type domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CZA3_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 1.250e-11
Identity = 64/232 (27.59%), Postives = 114/232 (49.14%), Query Frame = 0
Query:  176 HGVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCD-LRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQ-QPVHSVCHTVDDE------LLCATMGGVWALRGATKGAEPRTSASGDRQES--VAEQLQIQAGPCCSLSESRGSSRESDVSMRRFLVSTRGSS-ASHTIFGLEESRTSPNMAAL 396
            HG+ K SL +   ++   +H + +RD +   +  G+G +L+TSFDRTLK+   +R++S V  +++E  GWSC W+  +   MFCG+ + +    V++FD+R T   V +L+       +P+HS+ +    +      LL A    V+     + G    +   G+ +++      +QI A  C S+S         D   ++ L S RG+S   H +  L  +   P + A+
Sbjct:  330 HGLLKISLRELSSQEYATIHCKPIRDAQCCPD--GSGLLLTTSFDRTLKLTSTVRSNSTVQCFNLENPGWSCCWNNDNPQYMFCGLANDT----VLMFDIRQTKAPVTRLQDHDKTGGKPLHSLIYIPRSDKSNASGLLAANFDHVFLWESNSNGESFSSGLQGNAEKARCTVFDMQIPAATCYSVSH--------DPMTQQVLGSFRGTSFTKHVVSALNITDGLPTLHAM 547          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A556THP3_BAGYA (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556THP3_BAGYA)

HSP 1 Score: 69.3 bits (168), Expect = 1.070e-8
Identity = 81/344 (23.55%), Postives = 140/344 (40.70%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDDELLCATMGGVWALRGATKGAEPRTSASGDRQESVAEQLQIQAGPCCSLSESRGSSRESDVSMRRFLVSTRGSSASHTIFGLEESRTSPNM-AALAEYTRVEDRASNLEATHEARRGNGGYSLVPENNNSMAERRLPVSGISAWASRWKAVPFVAQGHQSRHALSRSLLWAPTTGDNLFIAGGDEGTNQPWIWDAMTGQVCRRLASHASPVLDVALLE 519
            GV K S  + +    + +H +Q+R + F+ +  G   +LS SFD T+K+  L T++VV  Y+     WSC W   ++N ++ G+ + S    V ++D R T+  V++L A      PV S+ +           GG+  + G+ +G        G         L +++G C  +        + +   R  LV+ R              RT+P++   L E  R                        P  +++ A    PV   S        V     G  S+     ++  +P T D   +  GDEG+N   +WDA +G + ++L +   PV+D+   E
Sbjct:  381 GVKKISTVNLKASHYVPIHVKQIRGLAFNRQHDGL--LLSASFDNTIKLTSLFTNTVVQAYNTGKPVWSCCWCHDNNNYIYAGLSNGS----VRVYDTRDTSTHVQEL-APLRSSSPVVSLSYLPRAASNLFPCGGL--IAGSLEGGCFWEQVDGSTYRQHV--LPLESGGCTDI--------QVEPESRHCLVTYR------------PGRTNPSLRCVLMELNRS-----------------------PHQDSAQA----PVCSCSP-------VQTFTAGSSSKLLTKNAVFKSPAT-DATLVCAGDEGSNSTMVWDASSGALLQKLPADI-PVMDICPFE 657          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A1U8BV69_MESAU (E3 ubiquitin-protein ligase RFWD3 isoform X1 n=8 Tax=Cricetinae TaxID=10026 RepID=A0A1U8BV69_MESAU)

HSP 1 Score: 69.3 bits (168), Expect = 1.130e-8
Identity = 41/139 (29.50%), Postives = 75/139 (53.96%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDDELLCATMGGVWA 315
            GV   S A+ +  + I +H +Q+R + FS+ +   G +LS SFD T+K+  L T++VV  Y+     WSC W   ++N ++ G+ + S    ++++DLR+T   +++L      + P+ S+ +     +     GGV A
Sbjct:  463 GVKMLSTANMKSSQYIPMHSKQIRGLAFSSRS--KGLLLSASFDNTIKLTSLETNTVVQTYNTGRPAWSCCWCLDENNYIYAGLANGS----ILMYDLRNTNAYIQEL-VPQKARCPLVSLSYLPRAAVAAFPYGGVLA 594          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: UPI000C6DBBDA (E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=6 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DBBDA)

HSP 1 Score: 67.8 bits (164), Expect = 3.100e-8
Identity = 84/342 (24.56%), Postives = 139/342 (40.64%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDDELLCATMGGVWALRGATKGAEPRTSASGDRQESVAEQLQIQAGPCCSLSESRGSSRESDVSMRRFLVSTRGSSASHTIFGLEESRTSPNMAALAEYTRVEDRASNLEA--THEARRGNGGYSLVPENNNSMAERRLPVSGISAWASRWKAVPFVAQGHQSRHALSRSLLWAPTTGDNLFIA-GGDEGTNQPWIWDAMTGQVCRRLASHASPVLDV 515
            G+ K S  DFR  + + +H++ ++D+ F         VL+ S DR++K+ ++ ++S+V  Y++    WSC WS  D NQ F G+    ++ ++  FD R T   + +L  A   + PV  +      + +   +    +L G   G                     Q   CC L E +   RESD  +             H +  LE S TS +      +  V  R S   A  TH          ++ E     + R   V  I + +     +     G  S+  +S+S L+     ++  +A  GDE      IWDA  G+  ++L  +  PVLDV
Sbjct:  338 GIKKISTMDFRVSEFVSIHQKPIKDIAFHRSDT---LVLTASMDRSIKLTNVLSNSIVQSYTLPLEAWSCVWSKDDPNQFFVGL----KNGSIFQFDTRMTNSHIFQL-PAVGMKSPVIGL------QYIQKQLNSGSSLNGLLSG---------------------QLSTCC-LYEMK---RESDYKL-------------HPL-PLEGSFTSLSYEPGTGHVLVSCRPSGKHASVTH----------MLCELAIDESSRDSDVGNICSCS-----IIQSFSGGDSQVQISKSNLFLHPKNESCILACAGDERAQAALIWDACNGERLQQLKVNDPPVLDV 611          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A1A6HTS8_NEOLE (RING-type domain-containing protein n=9 Tax=Neotominae TaxID=337963 RepID=A0A1A6HTS8_NEOLE)

HSP 1 Score: 67.4 bits (163), Expect = 4.030e-8
Identity = 41/139 (29.50%), Postives = 75/139 (53.96%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHTVDDELLCATMGGVWA 315
            GV   S A+ +  + I +H +Q+R + FS+ +   G +LS SFD T+K+  L T++VV  Y+     WSC W   ++N ++ G+ + S    ++++DLR+T   +++L      + P+ S+ +     +     GGV A
Sbjct:  375 GVKMLSTANMKSSQYIPMHGKQIRGLAFSSXS--KGLLLSASFDNTIKLTSLETNTVVQTYNTGRPVWSCCWCLDENNYIYAGLANGS----ILIYDLRNTNAYIQEL-VPQKARCPLVSLSYLPRAAVAAFPYGGVLA 506          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: UPI0020209E5E (E3 ubiquitin-protein ligase RFWD3 isoform X2 n=8 Tax=Arvicolinae TaxID=39087 RepID=UPI0020209E5E)

HSP 1 Score: 67.4 bits (163), Expect = 4.580e-8
Identity = 35/108 (32.41%), Postives = 64/108 (59.26%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKL 284
            GV   S A+ +  + I +H +Q+R + FS+ +   G +LS SFD T+K+  L T++VV  Y+     WSC W   ++N ++ G+ + S    ++++DLR+T   +++L
Sbjct:  478 GVKMLSTANMKSSQYIPMHSKQIRGLAFSSRS--KGLLLSASFDNTIKLTSLETNTVVQTYNTGRPVWSCCWCLDENNYIYAGLANGS----ILIYDLRNTNAYIQEL 579          
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Match: A0A087T1N0_STEMI (E3 ubiquitin-protein ligase RFWD3 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087T1N0_STEMI)

HSP 1 Score: 65.5 bits (158), Expect = 1.490e-7
Identity = 36/113 (31.86%), Postives = 62/113 (54.87%), Query Frame = 0
Query:  177 GVTKFSLADFRYEKNIFLHREQVRDVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSATDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAAN 289
            G  K S  D +  + +++H++ +RD+ F    G    VL+ S D+++++ ++ T++VV  Y V+ + WSC W A D    F G+    +S  V LFD+R T+  V +L    N
Sbjct:  279 GFRKLSTMDMKPSEFVWVHQKPIRDMAFHVHDG---LVLTGSLDKSVRITNILTNTVVQTYVVDSDVWSCAWDADDPVYFFAGL----KSGGVYLFDIRVTSRYVHELPRFGN 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1677.4226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5JB60_9PHAE2.280e-16853.46RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LKW0_ECTSI1.220e-13850.46RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6P8J5H9_ACTTE4.090e-1825.07E3 ubiquitin-protein ligase RFWD3-like n=2 Tax=Act... [more]
A0A433CZA3_9FUNG1.250e-1127.59RING-type domain-containing protein n=1 Tax=Jimger... [more]
A0A556THP3_BAGYA1.070e-823.55E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Bagarius... [more]
A0A1U8BV69_MESAU1.130e-829.50E3 ubiquitin-protein ligase RFWD3 isoform X1 n=8 T... [more]
UPI000C6DBBDA3.100e-824.56E3 ubiquitin-protein ligase RFWD3-like isoform X1 ... [more]
A0A1A6HTS8_NEOLE4.030e-829.50RING-type domain-containing protein n=9 Tax=Neotom... [more]
UPI0020209E5E4.580e-832.41E3 ubiquitin-protein ligase RFWD3 isoform X2 n=8 T... [more]
A0A087T1N0_STEMI1.490e-731.86E3 ubiquitin-protein ligase RFWD3 (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 392..412
NoneNo IPR availableCOILSCoilCoilcoord: 4..38
NoneNo IPR availablePANTHERPTHR16047:SF7E3 UBIQUITIN-PROTEIN LIGASE RFWD3coord: 171..541
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 171..541
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 178..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1677contigH-elongata_contig1677:6288..10591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1677.4226.1mRNA_H-elongata_contig1677.4226.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1677 6269..10796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1677.4226.1 ID=prot_H-elongata_contig1677.4226.1|Name=mRNA_H-elongata_contig1677.4226.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=544bp
MGRLDEEKRLRKQCEAERVRLAIENESLKDRLARLTLREDATIAAGQSTD
GRRSRQTPAASCCLTLGRPLQPTSSTPPPGPTPRVMQGRRSSAVPSLPAA
GTINNTSSGNGHGSGNECGENAFGEADTTTRLRFELTLSKGLRSGRVAEF
AGGEAGALLVSQEFRAAAGARGLMRHGVTKFSLADFRYEKNIFLHREQVR
DVKFSAEAGGAGYVLSTSFDRTLKVCDLRTDSVVIEYSVEGNGWSCQWSA
TDSNQMFCGIVDSSRSSAVILFDLRSTAGAVRKLRAAANQQQPVHSVCHT
VDDELLCATMGGVWALRGATKGAEPRTSASGDRQESVAEQLQIQAGPCCS
LSESRGSSRESDVSMRRFLVSTRGSSASHTIFGLEESRTSPNMAALAEYT
RVEDRASNLEATHEARRGNGGYSLVPENNNSMAERRLPVSGISAWASRWK
AVPFVAQGHQSRHALSRSLLWAPTTGDNLFIAGGDEGTNQPWIWDAMTGQ
VCRRLASHASPVLDVALLEGRSWGVGLLAAVSQGEMKMYQTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037381RFWD3
IPR036322WD40_repeat_dom_sf