prot_H-elongata_contig16759.4215.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16759.4215.1
Unique Nameprot_H-elongata_contig16759.4215.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length419
Homology
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BLAST of mRNA_H-elongata_contig16759.4215.1 vs. uniprot
Match: A0A6H5KVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG9_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 7.200e-65
Identity = 110/153 (71.90%), Postives = 122/153 (79.74%), Query Frame = 0 
Query:  266 RRGHAERPGPAHSVEEYLANTQRGREAVASISVGTAFWIKFSDTKEAWLECGVVKKVHQKSAVPYEVEWRPYDSSGCDLALNPKKRVALTPRLFVGKPDDFEPTVEGDPPAGTAPRGEFKVTTKKHLLTVPPIGSWCIVKDDQPWGSLGPFAF 418
            RRG +E PGPAHSVEEYLANT++G EAVASI  GT FWIKFSDT+EAW+EC VV KVH +SAVPYEV WRP+DS GCDLALN KKR+ALTPRLF+  P + E   E DPPAGTA RG F+   KK  LTVPPIGSWCIVK DQPWG L PF +
Sbjct: 1588 RRGQSESPGPAHSVEEYLANTKKGTEAVASIKEGTVFWIKFSDTREAWVECAVVTKVHPRSAVPYEVTWRPFDSGGCDLALNAKKRIALTPRLFMSSPANPELAGENDPPAGTARRGGFQPARKKFKLTVPPIGSWCIVKPDQPWGQLDPFTY 1740
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BLAST of mRNA_H-elongata_contig16759.4215.1 vs. uniprot
Match: D7G2E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E8_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 9.330e-65
Identity = 109/153 (71.24%), Postives = 123/153 (80.39%), Query Frame = 0 
Query:  266 RRGHAERPGPAHSVEEYLANTQRGREAVASISVGTAFWIKFSDTKEAWLECGVVKKVHQKSAVPYEVEWRPYDSSGCDLALNPKKRVALTPRLFVGKPDDFEPTVEGDPPAGTAPRGEFKVTTKKHLLTVPPIGSWCIVKDDQPWGSLGPFAF 418
            RRG +E PGPAHSVEEYLANT++G EAVASI  GT FWIKFSDT+EAW+EC VV KV+ +SAVPYEV WRP+DS GCDLALN KKR+ALTPRLFV  P + EP  E DPPAGTA +G F+   KK  LTVPPIGSWCIVK D+PWG L PF +
Sbjct: 1335 RRGQSESPGPAHSVEEYLANTKKGTEAVASIKEGTVFWIKFSDTREAWVECAVVSKVYPRSAVPYEVTWRPFDSGGCDLALNAKKRIALTPRLFVSSPANPEPAGENDPPAGTARQGGFQPARKKFKLTVPPIGSWCIVKPDRPWGQLEPFTY 1487
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16759.4215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVG9_9PHAE7.200e-6571.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2E8_ECTSI9.330e-6571.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16759contigH-elongata_contig16759:1630..4782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16759.4215.1mRNA_H-elongata_contig16759.4215.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16759 1630..6045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16759.4215.1 ID=prot_H-elongata_contig16759.4215.1|Name=mRNA_H-elongata_contig16759.4215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=419bp
APDGVLRAPEAPLSPAPSFGVAASSRDSENGCDPVNSTNGDTSNGCKAAN
GGSTSGSTRDAVKSGDPANSGGTGGGGGKTDGGDSSTITITTEAARALSP
PRERPSPPRIACPATPSTPNHFKWPPSPIEVSPSLATPARSSSATLSVDA
ISPAPETPTLANDAVASRLVSGTPNDDVAAIATGELTTAKTIPHEESSPR
GAVDPRRDDVSYSRSVVFASPVRGKRILVPPAPAEKDAGKSTTPKKTKRR
DSSNNAVAPRPLKSSRRGHAERPGPAHSVEEYLANTQRGREAVASISVGT
AFWIKFSDTKEAWLECGVVKKVHQKSAVPYEVEWRPYDSSGCDLALNPKK
RVALTPRLFVGKPDDFEPTVEGDPPAGTAPRGEFKVTTKKHLLTVPPIGS
WCIVKDDQPWGSLGPFAF*
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