prot_H-elongata_contig167448.4207.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig167448.4207.1
Unique Nameprot_H-elongata_contig167448.4207.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length35
Homology
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A6H5KUT0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT0_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 4.450e-8
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    2 LLQIKVLPCGNEFHAECVDCWLERKTLCPMCKV 34
            +L IKVLPCG++FH++C+D WLE K  CP+CKV
Sbjct:    3 VLLIKVLPCGHDFHSDCLDPWLEVKAECPLCKV 35          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A822XPG5_NELNU (RING-type domain-containing protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822XPG5_NELNU)

HSP 1 Score: 50.8 bits (120), Expect = 1.380e-7
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    4 QIKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            +I+ LPC ++FH +C+D WL RKTLCP+CK
Sbjct:   22 KIRHLPCLHKFHKDCIDPWLRRKTLCPVCK 51          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A2P6NUT9_9EUKA (RING finger protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUT9_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 2.150e-7
Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 0
Query:    5 IKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            ++VLPCG++FH EC+D WL+++ LCP+CK
Sbjct:   95 VRVLPCGHDFHVECIDEWLKQRLLCPLCK 123          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A7R9YY65_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YY65_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 3.160e-7
Identity = 16/29 (55.17%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    5 IKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            ++ LPCG+EFHAEC+D W++R   CP+C+
Sbjct:  188 LRTLPCGHEFHAECIDSWMDRNLTCPLCR 216          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A7S2EA99_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA99_TRICV)

HSP 1 Score: 52.4 bits (124), Expect = 3.540e-7
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 0
Query:    4 QIKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            +++ LPCG+EFH +CVD WLE  T CP C+
Sbjct:   29 EVRTLPCGHEFHKDCVDAWLENHTSCPACR 58          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: D8LQ38_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ38_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 4.230e-7
Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    5 IKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            IKVLPCG++FH++C+D WLE K  CP+CK
Sbjct:  154 IKVLPCGHDFHSDCLDPWLEVKAECPLCK 182          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A0D2MUW8_9CHLO (E3 ubiquitin-protein ligase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MUW8_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 4.740e-7
Identity = 16/29 (55.17%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    5 IKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            +K LPCG+ +H+EC+D WLE+  +CP+CK
Sbjct:  218 LKQLPCGHSYHSECIDAWLEKSAVCPLCK 246          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A2E9PVC4_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E9PVC4_9EURY)

HSP 1 Score: 52.8 bits (125), Expect = 5.690e-7
Identity = 18/31 (58.06%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    4 QIKVLPCGNEFHAECVDCWLERKTLCPMCKV 34
            ++++LPCG+ FHAECVD WL+   +CP+CKV
Sbjct: 2114 ELRLLPCGHCFHAECVDAWLQINRICPICKV 2144          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A804KN28_MUSAM ((wild Malaysian banana) hypothetical protein n=4 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KN28_MUSAM)

HSP 1 Score: 52.4 bits (124), Expect = 7.840e-7
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    5 IKVLPCGNEFHAECVDCWLERKTLCPMCK 33
            I+ LPC ++FH EC+D WL RKTLCP+CK
Sbjct:  821 IRHLPCLHKFHKECIDTWLRRKTLCPVCK 849          
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Match: A0A015IC27_RHIIW (RING-type domain-containing protein n=8 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015IC27_RHIIW)

HSP 1 Score: 52.4 bits (124), Expect = 7.870e-7
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    4 QIKVLPCGNEFHAECVDCWLERKT-LCPMCK 33
            Q++ LPCG+EFH+EC+D WL +K+ LCP+CK
Sbjct:  476 QLRALPCGHEFHSECIDPWLTQKSSLCPLCK 506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167448.4207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUT0_9PHAE4.450e-863.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A822XPG5_NELNU1.380e-760.00RING-type domain-containing protein n=1 Tax=Nelumb... [more]
A0A2P6NUT9_9EUKA2.150e-758.62RING finger protein n=1 Tax=Planoprotostelium fung... [more]
A0A7R9YY65_9CHLO3.160e-755.17Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A7S2EA99_TRICV3.540e-756.67Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
D8LQ38_ECTSI4.230e-765.52RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0D2MUW8_9CHLO4.740e-755.17E3 ubiquitin-protein ligase n=1 Tax=Monoraphidium ... [more]
A0A2E9PVC4_9EURY5.690e-758.06Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A804KN28_MUSAM7.840e-765.52(wild Malaysian banana) hypothetical protein n=4 T... [more]
A0A015IC27_RHIIW7.870e-761.29RING-type domain-containing protein n=8 Tax=Rhizop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..34
e-value: 2.5E-10
score: 41.7
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 8..33
e-value: 8.6E-8
score: 32.4
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig167448contigH-elongata_contig167448:298..402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig167448.4207.1mRNA_H-elongata_contig167448.4207.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig167448 298..402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig167448.4207.1 ID=prot_H-elongata_contig167448.4207.1|Name=mRNA_H-elongata_contig167448.4207.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
GLLQIKVLPCGNEFHAECVDCWLERKTLCPMCKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR024766Znf_RING_H2