prot_H-elongata_contig16743.4206.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig16743.4206.1
Unique Name	prot_H-elongata_contig16743.4206.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	90

Homology

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: D8LES4_ECTSI (CCT-theta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES4_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 7.170e-47
Identity = 81/90 (90.00%), Postives = 86/90 (95.56%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            MCMHFIEKYEMMV+KV SKWELRR+CNAVHATALVRMGAPTPDEMG C+LVEVRE+GLRKVTVFSQ+DDDSRIATIVL AST SLLNDLE
Sbjct:  305 MCMHFIEKYEMMVIKVLSKWELRRICNAVHATALVRMGAPTPDEMGDCALVEVREVGLRKVTVFSQDDDDSRIATIVLRASTQSLLNDLE 394

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: A0A6H5KSW1_9PHAE (CCT-theta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW1_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.010e-42
Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSL 85
            MCMHFIEKYEMMV+KV SKWELRR+CNAVHATALVRMGAPTPDEMG C+LVEVRE+GLRKVTVFSQ+DDDSRIATIVL A + SL
Sbjct:  305 MCMHFIEKYEMMVIKVLSKWELRRICNAVHATALVRMGAPTPDEMGDCALVEVREVGLRKVTVFSQDDDDSRIATIVLRARSVSL 389

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: K3WHS8_GLOUD (CCT-theta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHS8_GLOUD)

HSP 1 Score: 132 bits (331), Expect = 3.130e-34
Identity = 60/90 (66.67%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M +HF+EKY+++ VK+QSKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+EIG +KVTVF+QED+D++I+TI+L ASTD++LND+E
Sbjct:  305 MALHFLEKYKLLAVKIQSKWELRRLCRAVNANALVRLGAPTPDEMGLCDSVTVKEIGGKKVTVFNQEDEDAKISTIILRASTDNVLNDIE 394

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: A0A425BWK5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425BWK5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.960e-34
Identity = 60/90 (66.67%), Postives = 77/90 (85.56%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M MHF+EKY +M +K+QSKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+EIG +KVTVF Q+ +D++I+TIVL ASTD++LND+E
Sbjct:  183 MAMHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFQQDQEDAKISTIVLRASTDNVLNDIE 272

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: A0A485KST6_9STRA (CCT-theta n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KST6_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.590e-33
Identity = 57/90 (63.33%), Postives = 82/90 (91.11%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M +HF+EKYE++ +++QSKWELRR+C AV+ATALVR+GAPTP+EMG C  V+V+EIG +K+TVFSQ+++D++++TI+L ASTD++LNDLE
Sbjct:  305 MALHFLEKYELLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVQVKEIGGKKITVFSQDEEDAKMSTIILRASTDNVLNDLE 394

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: A0A067BSY5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BSY5_SAPPC)

HSP 1 Score: 125 bits (313), Expect = 2.030e-33
Identity = 54/90 (60.00%), Postives = 79/90 (87.78%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M +HF+EKY+++ +++QSKWELRR+C AV+ATALVR+GAPTP+EMG C  V V EIG +K+T+F Q+++D++++TI+L ASTD++LNDLE
Sbjct:   35 MALHFLEKYKLLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDFVGVHEIGGKKITIFRQDEEDAKMSTIILRASTDNVLNDLE 124

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: H3G986_PHYRM (CCT-theta n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3G986_PHYRM)

HSP 1 Score: 129 bits (323), Expect = 4.210e-33
Identity = 59/90 (65.56%), Postives = 77/90 (85.56%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M +HF+EKY +M +K+QSKWELRR+C AV+A A+VR+GAPTPDEMG C  V V+EIG +KVTVF QE +D++I+TIVL ASTD++LND+E
Sbjct:  305 MSLHFLEKYNLMAIKIQSKWELRRLCRAVNANAMVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFEQEQEDAKISTIVLRASTDNVLNDIE 394

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: M4B3A9_HYAAE (CCT-theta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3A9_HYAAE)

HSP 1 Score: 128 bits (322), Expect = 6.880e-33
Identity = 59/90 (65.56%), Postives = 77/90 (85.56%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M +HF+EKY +M +K+QSKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+EIG +KVTVF Q+ +D++I+TIVL ASTD++LND+E
Sbjct:  305 MALHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVMVKEIGGKKVTVFQQDQEDAKISTIVLRASTDNVLNDIE 394

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: A0A2D4C5B0_PYTIN (CCT-theta n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5B0_PYTIN)

HSP 1 Score: 127 bits (320), Expect = 2.300e-32
Identity = 58/90 (64.44%), Postives = 78/90 (86.67%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M MHF+EKY++M +K+QSKWELRR+C AV+A ALVR+GAPTPDEMG C  V V+EIG +KVT+F QE +D++++TIVL AST+++LND+E
Sbjct:  485 MAMHFLEKYQLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVMVKEIGGKKVTIFRQEKEDAKMSTIVLRASTENVLNDIE 574

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BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Match: A0A1W0AAN5_9STRA (CCT-theta (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAN5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.550e-32
Identity = 56/90 (62.22%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSLVEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE 90
            M +HF+EKY+++ +++QSKWELRR+C AV+ATALVR+GAPTP+EMG C  V V+E+G +KVT+FSQE++D++++TI+L ASTD++LNDLE
Sbjct:  319 MALHFLEKYKLLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVAVQEVGGKKVTIFSQEEEDAKMSTIILRASTDNVLNDLE 408

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot

BLAST of mRNA_H-elongata_contig16743.4206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LES4_ECTSI	7.170e-47	90.00	CCT-theta n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A6H5KSW1_9PHAE	1.010e-42	87.06	CCT-theta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxI...	[more]
K3WHS8_GLOUD	3.130e-34	66.67	CCT-theta n=1 Tax=Globisporangium ultimum (strain ...	[more]
A0A425BWK5_9STRA	3.960e-34	66.67	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A485KST6_9STRA	1.590e-33	63.33	CCT-theta n=6 Tax=Saprolegniaceae TaxID=4764 RepID...	[more]
A0A067BSY5_SAPPC	2.030e-33	60.00	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]
H3G986_PHYRM	4.210e-33	65.56	CCT-theta n=27 Tax=Peronosporaceae TaxID=4777 RepI...	[more]
M4B3A9_HYAAE	6.880e-33	65.56	CCT-theta n=1 Tax=Hyaloperonospora arabidopsidis (...	[more]
A0A2D4C5B0_PYTIN	2.300e-32	64.44	CCT-theta n=2 Tax=Pythium insidiosum TaxID=114742 ...	[more]
A0A1W0AAN5_9STRA	2.550e-32	62.22	CCT-theta (Fragment) n=1 Tax=Thraustotheca clavata...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 2..90 e-value: 1.4E-16 score: 60.2
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10		coord: 1..72 e-value: 7.9E-25 score: 89.1
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 1..78
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 1..90
None	No IPR available	PANTHER	PTHR11353:SF19	CHAPERONIN-CONTAINING TCP1, SUBUNIT 8 (THETA)	coord: 1..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig16743	contig	H-elongata_contig16743:5541..6779 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig16743.4206.1	mRNA_H-elongata_contig16743.4206.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig16743 5541..6788 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig16743.4206.1 ID=prot_H-elongata_contig16743.4206.1|Name=mRNA_H-elongata_contig16743.4206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MCMHFIEKYEMMVVKVQSKWELRRVCNAVHATALVRMGAPTPDEMGSCSL
VEVREIGLRKVTVFSQEDDDSRIATIVLGASTDSLLNDLE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002423	Cpn60/TCP-1
IPR027409	GroEL-like_apical_dom_sf