prot_H-elongata_contig167106.4198.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig167106.4198.1
Unique Nameprot_H-elongata_contig167106.4198.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.100e-30
Identity = 55/120 (45.83%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD   IR+RW RWF  LLNTKSP ++ +  + + +WP   PL   P+++E+   +R +A  KAVGP+ +  E  K
Sbjct:   46 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLREVEEAVREMANRKAVGPDDLPAELIK 165          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5K3I4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I4_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.480e-30
Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPE 112
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD  L R+RW RWF  LLNTKSP ++ + T+ + QWP   PL   P++ E+   +R +A  KAVGP+
Sbjct:  107 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPD 218          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5KXZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ7_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 8.570e-30
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0
Query:    2 VRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            VR+LE + REGD+AGFY+HL  +++E K+  +S  IKDE G +LRD   IR+RW RWF  LLNTKSP ++ +  + + +WP   PL   P++ E+   +R +A  KAVGP+ +  E  K
Sbjct:   24 VRQLEKKSREGDQAGFYRHLNMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIK 142          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5KJR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.760e-29
Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVE 117
            +VR+LE + REGD+AGFY+HLK +++E K+  +S   KDE G ++RD   IR+RW RWF  LLNTKSP ++ +  + + QWP   PL   P++ E+   +R +A  KAVGP+ +  E
Sbjct:   24 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNTKDEDGKVIRDPTFIRQRWARWFHXLLNTKSPTIDLHAADKVKQWPTYVPLDDIPSLPEVEEAVREMANRKAVGPDDLPAE 140          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5K397_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K397_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.770e-29
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPE 112
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD   IR+RW RWF  LLNTKSP ++ +  + + +WP   PL   P++ E+   +R +A  KAVGP+
Sbjct:   82 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPD 193          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.660e-29
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD  L R+RW RWF  LLNTKSP ++ + T+ + QWP   PL   P++ E+   +R +A  KAVGP+ +  E  K
Sbjct:  257 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIK 376          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.700e-29
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD  L R+RW RWF  LLNTKSP ++ + T+ + QWP   PL   P++ E+   +R +A  KAVGP+ +  E  K
Sbjct:   42 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIK 161          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.710e-29
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD  L R+RW RWF  LLNTKSP ++ + T+ + QWP   PL   P++ E+   +R +A  KAVGP+ +  E  K
Sbjct:  395 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIK 514          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.740e-29
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD  L R+RW RWF  LLNTKSP ++ + T+ + QWP   PL   P++ E+   +R +A  KAVGP+ +  E  K
Sbjct:  507 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIK 626          
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.770e-29
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVLIRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDIRSLAKEKAVGPEGVSVEPFK 120
            +VR+LE + REGD+AGFY+HLK +++E K+  +S  IKDE G +LRD  L R+RW RWF  LLNTKSP ++ + T+ + QWP   PL   P++ E+   +R +A  KAVGP+ +  E  K
Sbjct:  628 YVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIK 747          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167106.4198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L012_9PHAE1.100e-3045.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3I4_9PHAE2.480e-3049.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KXZ7_9PHAE8.570e-3045.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJR4_9PHAE1.760e-2945.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K397_9PHAE1.770e-2947.32Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5K8Z5_9PHAE5.660e-2947.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUB0_9PHAE5.700e-2947.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC90_9PHAE5.710e-2947.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE5.740e-2947.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDI8_9PHAE5.770e-2947.50Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig167106contigH-elongata_contig167106:34..393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig167106.4198.1mRNA_H-elongata_contig167106.4198.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig167106 34..393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig167106.4198.1 ID=prot_H-elongata_contig167106.4198.1|Name=mRNA_H-elongata_contig167106.4198.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
FVRKLETRVREGDRAGFYKHLKTMNLERKQDCSSAYIKDEGGILLRDAVL
IRERWVRWFQTLLNTKSPALEPNITEGIDQWPENTPLGIQPTMQELTNDI
RSLAKEKAVGPEGVSVEPFK
back to top