prot_H-elongata_contig16667.4179.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16667.4179.1
Unique Nameprot_H-elongata_contig16667.4179.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
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BLAST of mRNA_H-elongata_contig16667.4179.1 vs. uniprot
Match: A0A6H5JC06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC06_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.650e-31
Identity = 64/119 (53.78%), Postives = 84/119 (70.59%), Query Frame = 0 
Query:    1 EKLNVTSILAPDVKTGSSVFWIKKVNPQLPPLHVTAGSSALELSENWCGAHGLGPSQVPIVAWKLLEAYPAQMEVTRNSTELSQARIALGYAACQKEVLVVVFLVGCGFAL-RKWWTWK 118
            ++L ++S+LAPDV+TG+S+FW+K V+P LP  +VTAGSSALE+SE +C  H LGPSQV   AWKLL+AYP QME  R    L  AR+ L +AACQ+EV  V  +     A  R+WW +K
Sbjct:  320 KRLTLSSVLAPDVETGTSIFWVK-VDPSLPEAYVTAGSSALEISERFCRTHNLGPSQV---AWKLLDAYPVQMEAARRDGTLLPARVTLRHAACQREVAFVSIVAVLWVARKRRWWLFK 434
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BLAST of mRNA_H-elongata_contig16667.4179.1 vs. uniprot
Match: D7G977_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G977_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.320e-13
Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = 0 
Query:    1 EKLNVTSILAPDVKTGSSVFWIKKVNPQLPPLHVTAGSSALELSENWCGAHGLGPSQVPIVAWKLLEAYPAQMEVTRNSTELSQARIALGYAACQKEVLVVVFLVGCGFAL-RKWWTWK 118
            E+L ++S+LAPDV+ G+S+FW+K                                     VAWKLL+AYPAQME  R    L  AR+ L +AACQ+EV  V+ +     A  R+WW +K
Sbjct:  374 ERLTLSSVLAPDVEKGTSIFWVK-------------------------------------VAWKLLDAYPAQMEAARRDGTLLPARVTLRHAACQREVAFVLIVAVLWVARSRRWWLFK 455
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16667.4179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC06_9PHAE2.650e-3153.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G977_ECTSI2.320e-1336.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16667contigH-elongata_contig16667:822..1608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16667.4179.1mRNA_H-elongata_contig16667.4179.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16667 822..1608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16667.4179.1 ID=prot_H-elongata_contig16667.4179.1|Name=mRNA_H-elongata_contig16667.4179.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
EKLNVTSILAPDVKTGSSVFWIKKVNPQLPPLHVTAGSSALELSENWCGA
HGLGPSQVPIVAWKLLEAYPAQMEVTRNSTELSQARIALGYAACQKEVLV
VVFLVGCGFALRKWWTWK
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